Bioconductor AnnotationHub

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4.9k

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BiocFileCache AnnotationHub ExperimentHub

6 months ago • updated 13 days ago shepherl 3.9k

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5.6k

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ensembl ensembldb plant arabidopsis thaliana annotationhub

updated 4 weeks ago by Shiva • 0 • written 5.5 years ago by Guido Hooiveld ★ 3.9k

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337

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DNAMethylation AnnotationHub EPICv2manifest annotation

updated 24 days ago by Tim Peters ▴ 180 • written 4 weeks ago by s.malik • 0

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337

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Atlanticsalmon clusterPro Salmosalar AnnotationHub GeneOntology

updated 9 weeks ago by Michael Love 41k • written 9 weeks ago by Filipe • 0

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168

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annotatr AnnotationHub

3 months ago hayleyw • 0

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4.4k

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AnnotationHub AnnotationForge Pseudomonas_aeruginosa

updated 5 months ago by James W. MacDonald 65k • written 17 months ago by Manmohit ▴ 10

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clusterProfiler Annotationhub

updated 6 months ago by Guido Hooiveld ★ 3.9k • written 6 months ago by BS • 0

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575

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tximeta AnnotationHub AnnotationHubData

6 months ago Thon • 0

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5.8k

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Ensembl Rstudio ensembldb AnnotationHub ensdb

updated 7 weeks ago by shepherl 3.9k • written 2.3 years ago by jon.klonowski ▴ 40

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5.0k

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clusterProfiler AnnotationHub GO uniprot

updated 3 months ago by Guido Hooiveld ★ 3.9k • written 3.3 years ago by Alberto • 0

10 results • Page 1 of 1

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Comment: fgsea significant result by Chris • 0

Thanks ATpoint! Setting a fixed seed can reproduce the same result. However, if someone else analyze the same data with different seed, the…

Comment: SGSeq: moving toward diffex from SGSeq analysis by Sara • 0

Thank you for your response. I have another question about saving the sgvc result as a CSV file. I would appreciate your help, please. ``` …

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0

I tried different block lengths first and considered 100000 to be ideal because of the almost similar inter-range distance. S1= bootRange…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 41k

The segmentation and block length are key parameters. We recommend for example blocks of length ~500kb. It would help if you would post yo…

Answer: Handling multiple differential expression comparisons by Michael Love 41k

It's typical that results are presented with each group having its own FDR control. So presenting each comparison with the adjusted p-va…

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Answer: fgsea significant result

package goseq seems to be not available on the latest version of R

Print Differentially Expressed Exons From Dexseq Results

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