Showing : biomarkers • reset
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Job: Postdoc position - Genetic epi/statistical genetics
GWAS cancer biomarkers PRS
3.5 years ago Sarah • 0
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Job: Cancer Bioinformatician @ University of East Anglia - Norwich Medical School, UK
cancer postdoc biomarkers Biobase
4.7 years ago Daniel Brewer ▴ 100
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Job: Senior Research Associate in Bioinformatics @ University of East Anglia - Norwich Medical School, UK
Biobase bioinformatics biomarkers cancer
5.0 years ago Daniel Brewer ▴ 100
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Job: Part-time postdoc in Bioinformatics (0.5 FTE) @ UEA, Norwich, UK
cancer biomarkers bioinformatician Job
6.1 years ago Daniel Brewer ▴ 100
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How to identify Disease biomarkers " DNA sequences as biomarkers "
dnaseq pathway analysis protein biomarkers
7.9 years ago emadelhewihy • 0
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DESeq2 with 4 groups, 5 timepoints and more...!
deseq2 biomarkers
updated 8.3 years ago by ▴ 690 • written 8.3 years ago by • 0
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Adaptive Lasso and CrossValidation for SNV selection
adaptive-lasso snv biomarkers cv glmnet
9.0 years ago crichard • 0
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Job: PhD position at CRUK Manchester Institute
Prostate cancer noncoding rna biomarkers machine learning Job
9.7 years ago Hui Sun Leong ▴ 10
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Machine learning methods for feature selection and possible correlation with clinical data
machinelearning clinicaldata biomarkers data integration bioconductor
10.7 years ago svlachavas ▴ 840
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Possible Data integration of molecular data(transcriptomic) and imaging data from the same patients in R
data integration microarray bioconductor affymetrix biomarkers
updated 10.8 years ago by ★ 13k • written 10.8 years ago by ▴ 840
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Answer: NUPOP usage by shepherl 4.2k
You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
Comment: How can I correctly use phyloseq with Docker? by fnfgame • 0
In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment by Michael Love 43k
The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
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C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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