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cager
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Spam:
Can I cancel my British Airways flight and get a refund?
CAGEr
gep2pep
hcg110.db
7 months ago
Haggu
10
6
votes
8
replies
2.0k
views
CAGEr bug report: wrong consensus cluster results
CAGEr
updated 2.3 years ago by
Charles Plessy
▴ 180 • written 2.9 years ago by
Meng
▴ 30
0
votes
3
replies
1.5k
views
CAGEr: Problem when running getCTSS
CAGEr
updated 4.0 years ago by
Charles Plessy
▴ 180 • written 4.2 years ago by
Sergio
• 0
1
vote
2
replies
1.3k
views
CAGEexp vs CAGErseq
CAGEr
updated 4.0 years ago by
Charles Plessy
▴ 180 • written 4.6 years ago by
MatteoP
▴ 10
0
votes
0
replies
716
views
CAGEr consensusClustersDESeq2()
CAGEr
4.6 years ago
MatteoP
▴ 10
0
votes
5
replies
1.6k
views
CAGEr promoter width graph
CAGEr
updated 4.2 years ago by
Charles
• 0 • written 5.1 years ago by
leehami7407
• 0
1
vote
4
replies
1.3k
views
CAGEr quantilePositions() takes forever to run
CAGEr
quantilePositions
5.5 years ago
mirkocelii
▴ 40
1
vote
6
replies
1.9k
views
Behaviour of getCTSS on a CAGEset - extra reads?
cager
cage
ctss
updated 5.5 years ago by
Charles Plessy
▴ 180 • written 6.3 years ago by
sarac
▴ 20
1
vote
3
replies
1.3k
views
CAGEr: Quantile Values (q_0.1 and q_0.9) in CAGEset / CAGEexp objects
CAGEr
CAGEset
quantile
CAGEexp
5.5 years ago
mirkocelii
▴ 40
4
votes
6
replies
1.8k
views
CAGEr - Error with aggregateTagClusters() - invalid class IRanges object: width(x) cannot contain negative integers
CAGEr
IRanges
aggregateTagClusters
5.5 years ago
mirkocelii
▴ 40
2
votes
5
replies
1.9k
views
Does `clusterCTSS` and `aggregateTagClusters` sum raw-tag counts (and tpm) of the clustered tags into the resultant cluster?
CTSS clustering
tag per million
tag counts
CAGEr
updated 4.0 years ago by
Charles Plessy
▴ 180 • written 6.4 years ago by
regcastillo1990
• 0
0
votes
0
replies
1.4k
views
CAGEr get TSS in bed file
TSS
promoter
cage
cager
7.0 years ago
bharata1803
▴ 60
0
votes
1
reply
1.2k
views
a problem from import CTSStable in CAGEr
cager
CAGEr
7.0 years ago
Zhong JW
• 0
1
vote
2
replies
1.7k
views
error: getCTSS from CAGEexp class with removeFirstG=TRUE
cager
7.1 years ago
Pengcheng Yang
▴ 60
9
votes
18
replies
3.3k
views
bam2CTSS function error from CAGEr package
cager
7.1 years ago
Pengcheng Yang
▴ 60
4
votes
5
replies
1.7k
views
no import.bam function in CAGEr version 1.22.3
cager
7.1 years ago
Pengcheng Yang
▴ 60
1
vote
1
reply
1.2k
views
CAGEr: consensusCluster doesn't have dominant CTSS info
cager
7.4 years ago
Jingwen
▴ 10
0
votes
1
reply
1.4k
views
CAGEr - How to change plot axis range in CAGEr
BRAIN
CAGEr
BRAIN
CAGEr
updated 7.5 years ago by
Charles Plessy
▴ 180 • written 11.3 years ago by
Tobias Hohenauer
▴ 10
1
vote
1
reply
1.4k
views
clusterCTSS() error when running CAGEr
CAGEr
updated 8.1 years ago by
Charles Plessy
▴ 180 • written 8.1 years ago by
bo_yan
▴ 10
2
votes
8
replies
2.7k
views
CAGEr BAM files size issue
CAGEr
BAM
software error
R
biostrings
updated 8.3 years ago by
Charles Plessy
▴ 180 • written 8.3 years ago by
orzechowska.mag
▴ 10
4
votes
5
replies
2.7k
views
CAGEr : problem while filtering the bamFile
CAGEr
cage
updated 4.2 years ago by
jingxian.18
• 0 • written 9.7 years ago by
Vivek.b
▴ 100
0
votes
1
reply
1.4k
views
Scale Y-axis in "plotInterquantileWidth" function for an easier comparison between conditions
CAGEr
updated 10.8 years ago by
James W. MacDonald
68k • written 10.8 years ago by
calibula2000
• 0
22 results • Page
1 of 1
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Comment: Issues with downloading biomaRt - SeqInfo and S4 Vectors
by
James W. MacDonald
68k
Note that `S4Vectors` contains source code, so you will also need to [install RTools first][1]. [1]: https://cran.r-project.org/bin/win…
Answer: Issues with downloading biomaRt - SeqInfo and S4 Vectors
by
shepherl
4.2k
Our windows binaries are currently lagging behind as we are currently do not have a windows builder. If you are on windows you can try ins…
Comment: Issues with downloading biomaRt - SeqInfo and S4 Vectors
by
shepherl
4.2k
Can you please provide your `sessionInfo()` after doing `library("S4Vectors")`
Comment: VariantAnnotation does escape = within header string quotes
by
Daniel Cameron
▴ 40
I'm just stripping the entire line as a workaround using `meta(header(vcf))$DRAGENCommandLine = NULL`. Not ideal but at least subsequent pa…
Comment: Setting up a DESeq2 Design with Paired Data
by
Alexander
• 0
Hi Kevin, Firstly, thank you so much for not only a very prompt response, but one that is incredibly insightful and helps me learn DESeq2 …
Votes
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
Answer: Suppress warning in RHDF5 write
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shepherl
4.2k
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James W. MacDonald
68k
Popular Question
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Daniel Cameron
▴ 40
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Peter Hickey
▴ 760
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edward.esiribloom
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