Showing : codelink • reset
0
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Error in readCodelinkSet function
error codelink
updated 4 months ago by 68k • written 4 months ago by • 0
0
votes
1
reply
1.1k
views
log transformation the eset
codelink
updated 4.5 years ago by ★ 4.0k • written 4.5 years ago by • 0
2
votes
5
replies
1.9k
views
How to process Codelink UniSet Rat I Bioarray data
codelink
updated 7.5 years ago by ▴ 760 • written 7.5 years ago by ▴ 260
4
votes
2
replies
1.8k
views
How to check if the microarray data is from codelink
codelink microarray
updated 7.7 years ago by 21k • written 7.7 years ago by ▴ 260
5
votes
2
replies
1.5k
views
Codelink annotation error in Ubuntu 16.04
codelink annotation ubuntu
updated 8.8 years ago by 25k • written 8.8 years ago by ▴ 260
0
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3
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2.6k
views
Undefined columns selected in codelink R package.
r TXT codelink
10.2 years ago Agaz Hussain Wani ▴ 260
4
votes
4
replies
3.1k
views
Annotation package for Codelink 55K Human Array
r annotation codelink
updated 10.2 years ago by ▴ 760 • written 10.2 years ago by ▴ 260
6
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6
replies
2.4k
views
Can i set a path for readCodlinkSet()
r differential expression codelink
updated 10.3 years ago by ▴ 760 • written 10.3 years ago by ▴ 260
2
votes
5
replies
2.2k
views
Codelink differential expression and annotation
r codelink differential expression hwgcod
updated 10.3 years ago by ▴ 760 • written 10.3 years ago by ▴ 260
4
votes
4
replies
1.8k
views
Differential expression on codelink data
r codelink differential expression
updated 10.3 years ago by ▴ 760 • written 10.3 years ago by ▴ 260
3
votes
18
replies
3.6k
views
Annotating codelink data file
r codelink annotation annotationdbi
updated 10.4 years ago by ▴ 760 • written 10.4 years ago by ▴ 260
0
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10
replies
2.4k
views
How to get feature ID's from the raw codelink data.
r codelink
10.4 years ago Agaz Hussain Wani ▴ 260
3
votes
26
replies
5.8k
views
How to prepare targets.txt file in codelink.
r codelink
updated 10.4 years ago by ▴ 760 • written 10.4 years ago by ▴ 260
7
votes
9
replies
2.3k
views
codelink package is not installing
codelink r
10.4 years ago Agaz Hussain Wani ▴ 260
1
vote
2
replies
1.5k
views
problem of codelink
codelink
updated 10.6 years ago by ▴ 760 • written 10.6 years ago by ▴ 10
0
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0
replies
1.2k
views
Single channel microarray
codelink codelink
13.9 years ago Niraj Nepal ▴ 20
0
votes
6
replies
2.3k
views
annotation package for platform GPL2890
Annotation annotate codelink Annotation annotate codelink
updated 14.0 years ago by ▴ 150 • written 14.0 years ago by ▴ 380
0
votes
1
reply
1.4k
views
codelink database submission IDs changing
Annotation codelink Annotation codelink
updated 16.2 years ago by ▴ 760 • written 16.2 years ago by ▴ 30
0
votes
1
reply
1.3k
views
codelink analysis
codelink codelink
updated 17.1 years ago by ▴ 760 • written 17.1 years ago by ▴ 10
0
votes
1
reply
1.2k
views
Human whole genome Codelink arrays and paired analysis
codelink codelink
updated 17.9 years ago by ▴ 760 • written 17.9 years ago by ▴ 30
0
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5
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1.6k
views
from using biomaRt and r10kcod
r10kcod probe PROcess convert codelink r10kcod probe PROcess convert codelink
updated 18.4 years ago by ▴ 760 • written 18.4 years ago by ★ 1.2k
0
votes
3
replies
1.5k
views
annotations for Codelink arrays
Annotation GO Cancer r10kcod probe AnnBuilder PROcess biomaRt codelink Annotation GO
updated 18.5 years ago by ▴ 760 • written 18.5 years ago by ★ 1.2k
1
vote
0
replies
1.5k
views
new codelink annotation packages.
Annotation r10kcod probe codelink Annotation r10kcod probe codelink
19.2 years ago Diego Diez ▴ 760
0
votes
0
replies
1.2k
views
problem with chromosome location in annotations WAS: search archives and annnotate questions
Annotation GO annotate affy AnnBuilder codelink Annotation GO annotate affy AnnBuilder
19.4 years ago Diego Diez ▴ 760
0
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1
reply
1.5k
views
CodeLink Package: Not a Codelink exported file.
codelink ArrayExpress codelink ArrayExpress
updated 19.5 years ago by ▴ 760 • written 19.5 years ago by ▴ 600
0
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1
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1.2k
views
limma question
Microarray probe limma codelink Microarray probe limma codelink
updated 19.6 years ago by ▴ 30 • written 19.6 years ago by 68k
0
votes
5
replies
1.9k
views
annotations for Codelink arrays
Annotation codelink Annotation codelink
updated 20.0 years ago by ★ 2.9k • written 20.0 years ago by ▴ 720
0
votes
0
replies
1.2k
views
using codelink data on limma
Microarray limma codelink Microarray limma codelink
20.1 years ago Bert Wong ▴ 10
0
votes
3
replies
1.5k
views
Integrating Codelink data with bioconductor (using affy and limmafunctions)
Microarray Annotation Normalization affy limma PROcess codelink ASSIGN Microarray affy
updated 20.4 years ago by ▴ 760 • written 20.4 years ago by 53k
0
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0
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1.4k
views
Integrating Codelink data with bioconductor (using affy and limmafunctions)
Microarray Annotation Normalization affy limma PROcess codelink ASSIGN Microarray affy
20.4 years ago Diego Diez ▴ 760
0
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0
replies
1.1k
views
Amersham codelink help?
affy codelink affy codelink
20.9 years ago Luckey, John ▴ 90
0
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0
replies
1.3k
views
affy v codelink
affy limma codelink affy limma codelink
20.9 years ago Dick Beyer ★ 1.4k
0
votes
0
replies
1.1k
views
Comparison of Affymetrix and CodeLink chip
limma codelink limma codelink
20.9 years ago Binita Dutta ▴ 100
0
votes
0
replies
1.3k
views
vsn vs quantiles, bimodal data
Normalization vsn codelink Normalization vsn codelink
21.1 years ago Rohit Ghai ▴ 80
0
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0
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1.0k
views
Multiple fields in Imagene data files
codelink codelink
21.4 years ago Dick Beyer ★ 1.4k
0
votes
1
reply
1.2k
views
data transformation
Normalization vsn codelink Normalization vsn codelink
updated 21.5 years ago by ★ 13k • written 21.5 years ago by ▴ 10
36 results • Page 1 of 1
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Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi by ReinholdGaylord99 • 0
Thank you so much! https://www.nature.com/articles/s41467-021-25960-2
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design by Gordon Smyth 53k
I'm not sure that I understand. You have a dataset that, even after pseudo-bulking, still has 6000 samples? That is surprising. Retaining …
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design by abaed • 0
Hello again @gordonsmyth, I've now applied the analysis using a more detailed annotation of cell types/clusters, which includes about 100 …
Answer: Sharing a collection of datasets in ExperimentHub by shepherl 4.2k
107 packages would be a lot! It is certainly possible (and recommended) to implement one package that utilizes ExperimentHub for controlli…
Comment: GO.db and others package Download failure by James W. MacDonald 68k
Also, you never need to use anything but `BiocManager::install` to install any package, which has the beneficial side effect of ensuring th…
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Comment: readDNAStringSet with non DNA characters
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
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