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data.frame
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2
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664
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'Killed' error during RNAseq alignment
subjunc
data.frame
myExons
Rsubread
updated 12 months ago by
ATpoint
★ 4.2k • written 12 months ago by
Sukeerthi
• 0
0
votes
1
reply
654
views
?? Any R script for subtracting multiple controls from multiple patients in data.frame and assign 1 if output is less than 0
Rscript
data.frame
forloop
R
3.9 years ago
Ankit
▴ 20
1
vote
1
reply
1.3k
views
TCGA isoform expression quantification file - how to reshape data
data.frame
tcga
reshape data
updated 5.1 years ago by
Steve Lianoglou
★ 13k • written 5.1 years ago by
mario.zanfardino
▴ 160
0
votes
1
reply
756
views
Error in data.frame for limmaCtData function
software error
limma
data.frame
updated 5.7 years ago by
Gordon Smyth
51k • written 5.7 years ago by
azmir004
• 0
0
votes
1
reply
1.0k
views
Workflow Perraudeau F1000 - Bioconductor workflow for scRNA-seq
data.frame
read.table
updated 6.2 years ago by
davide risso
▴ 950 • written 6.2 years ago by
viviana.marin-esteban
• 0
0
votes
0
replies
1.0k
views
NOISeq: Need help with my data frame
R
noiseq
data.frame
6.4 years ago
aokoro
• 0
3
votes
2
replies
1.6k
views
AnnotationHub: A RPKM data.frame of Epigenomics RoadMap Project seems strange
annotationhub
roadmap project
rpkm
data.frame
7.7 years ago • updated 7.6 years ago
wcstcyx
▴ 30
0
votes
1
reply
1.2k
views
plotBed R data frame - last line plotted with line 1
sushi
plotBed
data.frame
8.2 years ago
waqasnayab
• 0
6
votes
3
replies
3.4k
views
How to transform cytometry data from CSV and not FCS file?
flowcore
transform
data.frame
updated 8.2 years ago by
Jiang, Mike
★ 1.3k • written 8.2 years ago by
Julia
▴ 20
3
votes
3
replies
1.5k
views
Sorting data frame derived from GRanges
granges
data.frame
sort
updated 8.6 years ago by
Michael Lawrence
★ 11k • written 8.6 years ago by
igor
▴ 50
2
votes
2
replies
894
views
Error when add `in` column into data.frame
data.frame
updated 8.8 years ago by
Ryan C. Thompson
★ 7.9k • written 8.8 years ago by
qiuworld.ou
• 0
2
votes
6
replies
1.7k
views
edgeR output error and data frame setting
EdgeR
data.frame
glmLRT
updated 8.8 years ago by
Gordon Smyth
51k • written 8.8 years ago by
amoltej
▴ 10
12 results • Page
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Comment: Trouble reading samplesheet in with diffbind to create dba
by
Mallory
• 0
Thank you for your reply! There mustve been something wierd going on with my peak formats as you pointed out. I recalled all the peaks and …
Answer: Trouble reading samplesheet in with diffbind to create dba
by
Anthony
• 0
I was struggling with this today too. For me it happened because my peak files were not in the correct format. The "10 elements" refers to …
Comment: gds in GEOmetadb 2023-06-26 version is empty
by
Frederico Moraes Ferreira
▴ 100
Try axel -n 20 https://gbnci.cancer.gov/geo/GEOmetadb.sqlite.gz
Comment: Most enriched pathway is not expressed when modifying universe parameter
by
James W. MacDonald
66k
The default for `enrichGO` is to subset to those with a p-value<0.05. You don't adjust that default argument, so you shouldn't have any GO …
Answer: In a 3 group DEG analysis with three batches, can I use 1 group in all three bat
by
Michael Love
42k
You can compare A and C thanks to the sharing of samples from B across 1, 2 and 3.
Votes
Answer: How to do DESeq2 on Kallisto Data
Comment: Most enriched pathway is not expressed when modifying universe parameter
Time-course, comparison of two groups
Answer: Behaviour of featureCounts when quantifying multi-mapping reads
Answer: GESA with certain gene list returns no result with human genom, but many result
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