Biostar ESet

Showing : eSet • reset

votes

7.6k

views

microarray affy eset

updated 5.0 years ago by Gordon Smyth 44k • written 5.0 years ago by mathavanbioinfo ▴ 20

votes

replies

7.2k

views

eset annotation

updated 6.6 years ago by Diego Diez ▴ 760 • written 6.6 years ago by Vani ▴ 20

votes

replies

5.2k

views

limma differential expression design matrix error eset

updated 6.5 years ago by Aaron Lun ★ 27k • written 6.5 years ago by Vani ▴ 20

votes

replies

2.6k

views

methylumi eSet illuminahumanmethylation450k.db featureFilter

updated 6.6 years ago by James W. MacDonald 58k • written 6.6 years ago by martens.christopher • 0

votes

replies

2.1k

views

eset annotation

updated 6.6 years ago by James W. MacDonald 58k • written 6.6 years ago by colonppg ▴ 30

vote

replies

1.9k

views

biobase eSet expressionSet

updated 5.2 years ago by Martin Morgan 25k • written 5.2 years ago by Guido Hooiveld ★ 3.2k

vote

995

views

limma microarray eset

6.5 years ago Vani ▴ 20

votes

replies

971

views

subsetting eSet

5.9 years ago Shamim Sarhadi ▴ 20

votes

895

views

limma eset error ebayes

updated 6.5 years ago by James W. MacDonald 58k • written 6.5 years ago by Vani ▴ 20

votes

767

views

scan.upc eset

updated 6.4 years ago by Stephen Piccolo ▴ 580 • written 6.4 years ago by Jo ▴ 20

votes

replies

716

views

biobase expressionset eset

updated 3.5 years ago by Martin Morgan 25k • written 3.5 years ago by andrew.birnberg ▴ 20

votes

replies

440

views

Minfi eset

4.0 years ago SplittingInfinity ▴ 60

vote

replies

330

views

affy eset

updated 11 months ago by James W. MacDonald 58k • written 11 months ago by AZ ▴ 30

13 results • Page 1 of 1

Recent ...

Replies

Comment: Uniform window size for different genes by James W. MacDonald 58k

Ah, I get it. You want the vertical height of the exons to be the same, regardless of the number of transcripts. That might be difficult to…

Comment: Uniform window size for different genes by rbenel ▴ 20

Hi James, Sorry if I was unclear. I am referring to the height of the model itself, strictly speaking visualization. For publication I wo…

Comment: Macbook M1 install genefilter failed by Ryan • 0

Yes, this solution worked for me as well.

Comment: DiffBind: Values of Called1 and Called2 do not appear to coincide with input pea by Rory Stark ★ 4.3k

Nothing too unusual, just a bug where in certain conditions the `Called` columns were being computed using the unmerged datasets. This onl…

Answer: Unusal standard deviation after rlog transformation and the homoscedasticity of by Michael Love 35k

I'm guessing this data does not conform well to the assumptions of the rlog, which are that variation is distributed a certain way from exp…

Votes

A: What does the relative-log expression normalization mean in the deseq2 wrapper f

What does the relative-log expression normalization mean in the deseq2 wrapper function ?

edgeR cpm() function with and without log2

A: edgeR cpm() function with and without log2

Awards • All