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edgeR edge

updated 3.2 years ago by Gordon Smyth 53k • written 3.2 years ago by Isa • 0

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edge Microarray longitudinal

3.9 years ago emily • 0

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edge DGE microarray

updated 6.3 years ago by Gordon Smyth 53k • written 6.3 years ago by joanasabinopinto • 0

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edge microarray limma affy

6.7 years ago soumyab.g ▴ 10

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edge

6.7 years ago xgt1986627 • 0

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edge RNA-seq

updated 6.7 years ago by James W. MacDonald 68k • written 6.7 years ago by xgt1986627 • 0

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microarray edge

6.7 years ago xgt1986627 • 0

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microarray edge

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edge differential gene expression timecourse interaction

7.5 years ago rubi ▴ 110

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edge qpcr qvalue

9.0 years ago • updated 8.0 years ago joe.d.moore.ii • 0

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edge timecourse fittimeseries

updated 10.2 years ago by Andrew Bass • 0 • written 10.3 years ago by warren.anderson • 0

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edge

updated 10.3 years ago by Aaron Lun ★ 29k • written 10.3 years ago by Arne Muller ▴ 20

12 results • Page 1 of 1

Recent ...

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Comment: [DESeq2] Changing dispersion estimates between runs of DESeq2 by colinmccornack • 0

FWIW: This seems to be due to architectural differences between two compute nodes I was running on, specifically with the DESeq2:::fitNbino…

Comment: Why does IDTaxa trainingSet for SILVA contain "_2" suffixes in the taxonomy name by Erik Wright ▴ 150

This has to do with the fact that some taxonomies reuse names at the same rank level. Common examples in the SILVA taxonomy are "Incertae S…

Comment: Deseq2 DE analysis of host-pathogen samples (model separately or jointly?) by a2a2ddrhaa • 0

For those taking a break from the lab, the CT777 Game download https://ct7777.pk/ offers a high-performance entry into online mobile gaming…

Answer: Subsetting data verses contrasts [DESeq2]? by ATpoint ★ 5.0k

This has been asked many times before, please search for relevant posts. In short: Generally it is least tedious to not split the data and …

Comment: Bulk RNAseq analysis for by Mariami • 0

Thank you so much for your help! will try to proceed with the suggestion

Votes

Comment: Are transformed values from rlog /vst log2 normalized counts?

Are transformed values from rlog /vst log2 normalized counts?

Answer: Bulk RNAseq analysis for

Answer: DiffBind differential analysis

Answer: Limma-voom sample weights and impact on DEG numbers

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