Showing : edge • reset
0
votes
2
replies
1.1k
views
Getting this error while trying to use edgeR "Error in as.vector(x, mode) : cannot coerce type 'closure' to vector of type 'any'"
edgeR edge
updated 17 months ago by 50k • written 17 months ago by • 0
0
votes
0
replies
617
views
Error in svd(X) when using edge lrt (or odp) function.
edge Microarray longitudinal
2.1 years ago emily • 0
0
votes
2
replies
858
views
Longitudinal Time-Course microarray experiment with two time points
edge DGE microarray
updated 4.5 years ago by 50k • written 4.5 years ago by • 0
0
votes
0
replies
757
views
Fold Change Calculation in edge package
edge microarray limma affy
4.9 years ago soumyab.g ▴ 10
0
votes
0
replies
594
views
Same results with static and time course analysis respectively in EDGE
edge
4.9 years ago xgt1986627 ▴ 10
0
votes
2
replies
616
views
Can EDGE analyse RNA-seq data?
edge RNA-seq
updated 4.9 years ago by 65k • written 4.9 years ago by ▴ 10
0
votes
0
replies
597
views
static experiment in EDGE
microarray edge
4.9 years ago xgt1986627 ▴ 10
1
vote
1
reply
642
views
export the significant results from EDGE
microarray edge
4.9 years ago xgt1986627 ▴ 10
0
votes
0
replies
854
views
Degrees of freedom and coefficients in an edge::deSet and edge::deFit objects
edge differential gene expression timecourse interaction
5.7 years ago rubi ▴ 110
1
vote
7
replies
1.6k
views
EDGE: Persistent lrt() and odp() command pi0est() error due to low p values
edge qpcr qvalue
7.2 years ago • updated 6.2 years ago joe.d.moore.ii • 0
0
votes
2
replies
1.3k
views
edge, timeseries analysis, model specification question
edge timecourse fittimeseries
updated 8.4 years ago by • 0 • written 8.5 years ago by • 0
3
votes
2
replies
1.5k
views
MedIP-Seq: IP over Input with edgeR
edge
updated 8.5 years ago by ★ 28k • written 8.5 years ago by ▴ 20
12 results • Page 1 of 1
Recent ...
Replies
Comment: Deseq2. decontXcounts not integers. Useful alternative? by ATpoint ★ 4.0k
I do not know this decontamination tool you use but generally: If these counts are basically "corrected" raw counts in the sense that they'…
Answer: Improving the design matrices vignette in RNAseq123 by Gordon Smyth 50k
Thanks to Shian Su, we have confirmed that the problem in the design matrices vignette html is caused by a bug in knitr 1.44 (to do with sp…
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2) by winwater0928 • 0
Thank you for your comment! I'll review my code from top to bottom.
Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k
So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.
Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k
Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;
Votes
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
Awards • All
Scholar to James W. MacDonald 65k
Supporter to JKim • 0
Popular Question to Gordon Smyth 50k
Popular Question to Chris • 0
Supporter to Jonathan ▴ 10
Locations • All
Portugal, 1 minute ago
Australia, 5 minutes ago
Wageningen University, Wageningen, the Netherlands, 27 minutes ago
WEHI, Melbourne, Australia, 52 minutes ago
United States, 1 hour ago
Traffic: 925 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6