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fold change
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5
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14
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7.9k
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Possible ways to select differential expressed genes using DeSeq2 or edgeR
R
deseq2
edger
differential gene expression
fold change
updated 3.8 years ago by
ATpoint
★ 5.0k • written 7.6 years ago by
Beginner
▴ 60
1
vote
2
replies
3.2k
views
diffBind report Fold scale
diffBind
Fold Change
updated 4.8 years ago by
Joe Nicholas
• 0 • written 7.1 years ago by
joseluis.ruiz
• 0
2
votes
4
replies
2.0k
views
Majority upregulated genes in edgeR
edger
differential expression
genes
fold change
updated 6.7 years ago by
Aaron Lun
★ 29k • written 6.7 years ago by
ilovesuperheroes1993
• 0
0
votes
0
replies
1.5k
views
PROBLEM WITH MFUZZ
mfuzz
fold change
log2
STANDARDISATION
7.7 years ago
prakashpandey1111
• 0
1
vote
1
reply
2.0k
views
What is the exact formula for the calculation of Fold Change (FC), p-val and q-val in Ballgown stattest?
ballgown
stattest
fold change
updated 8.0 years ago by
James W. MacDonald
68k • written 8.0 years ago by
Arindam
▴ 80
0
votes
1
reply
1.9k
views
Question on fold change calculation for microarray data
logfc
limma
fold change
updated 9.5 years ago by
Gordon Smyth
53k • written 9.5 years ago by
Claudia
▴ 10
2
votes
7
replies
3.4k
views
About differentially expressed genes that found by edgeR
edgeR
DE analysis
fold change
cpm
updated 9.6 years ago by
Ryan C. Thompson
★ 7.9k • written 9.6 years ago by
Sara
▴ 20
7 results • Page
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Comment: Question on processing compound protein groups in limpa
by
JKim
• 0
Many thanks. I appreciate your advice.
Answer: Question on processing compound protein groups in limpa
by
Gordon Smyth
53k
Different people have different ways of dealing with compound protein groups. You could just leave them in the analysis, in which case limp…
Answer: Correct usage of limpa for protein input
by
Gordon Smyth
53k
limpa can work on protein-level quantifications, but they must be intensity-based and must be on the log scale. From what I read (<https://…
Comment: A problem occurs when running the monocle2
by
a2a2hset32aa
• 0
Troubleshooting monocle2 errors in R 4.5.1 often points to package incompatibilities, particularly with newer versions of igraph. For resea…
Comment: Deadline Extended: EuroBioC2026 Call for Abstracts
by
a2a2hset32aa
• 0
Attending EuroBioC2026 is an excellent way for researchers to explore the intersection of technology and biology. For those seeking high qu…
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Answer: Question on processing compound protein groups in limpa
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
A: Interpretaion of dendrogram height in WGCNA?
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