Bioconductor Foldchange

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StatisticalMethod FoldChange edgeR RNASeq

4 months ago Sabiha ▴ 20

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2.3k

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FoldChange DiffBind lfcShrink

updated 9 months ago by Rory Stark ★ 5.2k • written 10 months ago by bhandary.8590 ▴ 20

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836

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FoldChange DiffBind lfcShrink Cut&TagData

10 months ago bhandary.8590 ▴ 20

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1.6k

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DESeq2 TPM Foldchange

updated 2.1 years ago by Michael Love 42k • written 2.1 years ago by dadca596 • 0

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903

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edgeR RNA-Seq log2 foldchange q_value

updated 2.3 years ago by Gordon Smyth 50k • written 2.3 years ago by johndavidgriner74 • 0

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1.1k

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sign FoldChange DESeq2 reference

updated 2.4 years ago by Michael Love 42k • written 2.4 years ago by yampolsk • 0

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4.8k

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DifferentialExpression DEA FC FoldChange edgeR

2.7 years ago zhxiaokang ▴ 20

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2.3k

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EdgeR RNAseq Foldchange

updated 2.8 years ago by swbarnes2 ★ 1.4k • written 2.9 years ago by najib • 0

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2.3k

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foldchange topGO DifferentialExpression enrichment

updated 3.5 years ago by Gordon Smyth 50k • written 3.5 years ago by lessismore ▴ 20

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1.4k

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limma microarray foldchange DEG GEO

updated 4.2 years ago by Gordon Smyth 50k • written 4.3 years ago by Pietro ▴ 40

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1.4k

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DEXSeq DTU salmon rnaseqDTU foldchange

updated 5.0 years ago by Michael Love 42k • written 5.3 years ago by fiona.dick91 ▴ 60

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1.4k

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limma RNAseq foldchange

5.2 years ago susana.amaral.teixeira ▴ 20

12 results • Page 1 of 1

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Comment: Can't post a question containing code? by NATASHA • 0

did you find a solution? I´m having the same problem

Comment: error by NATASHA • 0

Please ignore, i didnt copy all the scrip

Comment: Extremely small p-values using Limma for proteomic data by James W. MacDonald 65k

If you ever find yourself using the `@` function, you should reconsider what you are doing. There are vanishingly small instances when an e…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

Here is some example code <https://gist.github.com/mikelove/cbbc84634b6854c865cb5eb08ad9b245>

Comment: How to use spike-in information (sequences from another species) with DESeq2::DE by maria.soler • 0

Hi, I have a question barely related to this topic. Do you use a custom reference genome combining your organism and the one used as a spik…