Bioconductor Geneontology

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780

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Atlanticsalmon clusterPro Salmosalar AnnotationHub GeneOntology

updated 11 months ago by Michael Love 43k • written 11 months ago by Filipe • 0

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2.4k

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rnaseq rnaseqGene geneontology

updated 2.2 years ago by James W. MacDonald 67k • written 2.2 years ago by acram • 0

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1.1k

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microRNA gene RNASeqRData edgeR geneontology

2.3 years ago faiza • 0

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710

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GO GeneOntology LocusIDtogeneIDconversion

2.3 years ago BioinFo.X • 0

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2.5k

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Annotation GeneOntology topGO GO

updated 2.6 years ago by James W. MacDonald 67k • written 2.6 years ago by Raito92 ▴ 60

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1.1k

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GOstats Go.db GeneOntology

3.9 years ago MOHAMMAD • 0

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1.1k

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GO.db Annotation Clusterprofile GeneOntology

updated 3.9 years ago by Basti ▴ 780 • written 3.9 years ago by MOHAMMAD • 0

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1.7k

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topGO enrichmentanalysis geneontology

updated 4.0 years ago by Lluís Revilla Sancho ▴ 760 • written 4.0 years ago by Aini • 0

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8.2k

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clusterprofiler geneontology

updated 7.2 years ago by thokall ▴ 160 • written 7.2 years ago by giuseppe0525 • 0

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1.1k

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geneontology R go semantic similarity

updated 8.1 years ago by Valerie Obenchain ★ 6.8k • written 8.1 years ago by manasa22.reddy • 0

10 results • Page 1 of 1

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Answer: Postdoc/RA position: Software Engineer For R and High-Performance Computing by delhirussianescortscom • 0

Our escorts are well-groomed and well-trained to give you ultimate seduction and deep pleasure. If you're looking for hot Delhi air hostess…

Answer: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio by Robert Castelo ★ 3.4k

Following the discussion of this post, the package [gDNAx](https://bioconductor.org/packages/gDNAx) has been fixed in devel and release 1.4…

Answer: Selection of correct coefficients or contrasts in DESeq2 by James W. MacDonald 67k

Using R's model formulation for three-way interactions is probably not the way to go here. Or at least I wouldn't do it that way. An easier…

Comment: How to generate circular cnetplot and color nodes and edges in the same plot ? by Blandine • 0

Thank you so much ! It's working !

Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K? by James W. MacDonald 67k

Yes. If you have the Illumina IDs, then all the annotation data that `cpg.annotate` uses will be based on hg19. It doesn't matter if TCGA l…

Votes

A: DESeq2 interaction term

Comment: Recount3 data correspond to TCGA data

Answer: DESeq2- merging technical vs biological replicates

Answer: SingleCellExperiment convenience function for metadata+expression?

How to correct for tumor purity using DESeq2 to analyze TCGA tumor sample expression.

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