Bioconductor Genomeinfodbdata

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dada2 GenomeInfoDbData

updated 6.8 years ago by jiangjing_ing • 0 • written 6.9 years ago by navlern • 0

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GenomeInfoDbData "GenomeInfoDbData"package

updated 2.2 years ago by Hervé Pagès 16k • written 3.5 years ago by N.D.Hubot • 0

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DESeq2 RStudio GenomeInfoDbData hadnon-zeroexitstatus

updated 19 months ago by wshao9 • 0 • written 22 months ago by JoseR • 0

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GenomeInfoDbData

3.0 years ago ettore64 ▴ 10

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software error ballgown genomeinfodbdata genomeinfodb

updated 5.6 years ago by James W. MacDonald 65k • written 5.6 years ago by dualeahmed • 0

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GenomeInfoDbData phyloseq dada2

2.3 years ago ymtan • 0

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GenomeInfoDbData microbiome phyloseq

updated 21 months ago by Marcel Ramos 690 • written 21 months ago by kikiki • 0

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bioconductor GenomeInfoDbData

5.8 years ago svetlana.gorokhova • 0

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GenomeInfoDbData genomeinfodbdata

updated 8 months ago by James W. MacDonald 65k • written 8 months ago by 15753563659 ▴ 50

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GenomeInfoDb GenomeInfoDbData GenomicDistributionsData GenomicDistributions

22 months ago rashford • 0

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GenomeInfoDbData

8 months ago 15753563659 ▴ 50

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install GenomeInfoDbData

updated 4.0 years ago by James W. MacDonald 65k • written 4.0 years ago by lina.bird • 0

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GenomeInfoDb GenomeInfoDbData

updated 14 months ago by ATpoint ★ 4.1k • written 14 months ago by exferin • 0

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genomeinfodbdata

updated 5.2 years ago by Martin Morgan 25k • written 5.2 years ago by hdwhitti • 0

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GenomeInfoDbData

updated 6 months ago by shepherl 3.9k • written 6 months ago by remi.trimbour • 0

15 results • Page 1 of 1

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Answer: Once again a "Model matrix not full rank" by swbarnes2 ★ 1.3k

Replicate numbers, like the 1 in control_1 are fine in sample names, but never add them to anything else in colData. From the computer's p…

Answer: limma Intercept vs No-intercept models completely changing DMR results? by Gordon Smyth 50k

I'll add a little bit of general advice to James' answer. You seem to have the misunderstanding that you can change the design matrix but …

Answer: package goseq seems to be not available on the latest version of R by Gordon Smyth 50k

It is true that goseq isn't available for Bioc 3.19. That is because goseq depends on txbmaker, which is itself not yet available for Bioc…

Answer: limma Intercept vs No-intercept models completely changing DMR results? by James W. MacDonald 65k

This part: ``` design_intercept <- model.matrix(~Alt+Sex+Age+PC1, data=targets_Sherpa) colnames(design_intercept) <- c("AltSHP_LA","Al…

Comment: CombineArrays for EPIC and EPIC V2 by Kim • 0

Thank you Tim, this is a great help in getting me started!

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Answer: limma Intercept vs No-intercept models completely changing DMR results?

Answer: CombineArrays for EPIC and EPIC V2

Answer: Too many significant genes when integrating gtex and tcga

Comment: Too many significant genes when integrating gtex and tcga

A: Print Differentially Expressed Exons From Dexseq Results

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