Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
goprofiles
•
reset
0
votes
1
reply
1.1k
views
I want to convert the go enrichment result to a data frame (tidy data)with two column which one is the gene symbol and the other is go term. Any one…
GO.db
GOfuncR
GO
GOSim
goProfiles
updated 3.2 years ago by
Basti
▴ 780 • written 3.2 years ago by
yeluo
• 0
3
votes
9
replies
3.6k
views
Create object "Go3AnnDbBimap" and include it in a org.Xx.eg.db package to use with goProfiles and goTools
goprofiles
AnnotationForge
Bimap
GO
11.2 years ago
artur
▴ 80
0
votes
0
replies
2.0k
views
Ontology lack in goProfiles : no BP or CC just MF
GO
goProfiles
GO
goProfiles
11.7 years ago
Arnaud Mounier
▴ 40
0
votes
0
replies
1.6k
views
error while using goProfiles package on arabidopsis entrez gene IDs
GO
Organism
goProfiles
GO
Organism
goProfiles
12.3 years ago
Marc Carlson
★ 7.2k
0
votes
0
replies
1.9k
views
error while using goProfiles package on arabidopsis entrez gene IDs
goProfiles
goProfiles
12.3 years ago
Guest User
★ 13k
0
votes
2
replies
1.4k
views
Gene Ontologies exploration
goProfiles
GeneAnswers
goProfiles
GeneAnswers
updated 12.8 years ago by
Marc Carlson
★ 7.2k • written 12.8 years ago by
Jose M Garcia Manteiga
▴ 310
0
votes
2
replies
1.4k
views
Profiles
GO
goProfiles
GO
goProfiles
updated 13.2 years ago by
Steve Lianoglou
★ 13k • written 13.2 years ago by
Guest User
★ 13k
0
votes
2
replies
2.0k
views
How to make my own GO.db?
GO
goProfiles
GO
goProfiles
updated 15.5 years ago by
Marc Carlson
★ 7.2k • written 15.5 years ago by
Xiaohui Wu
▴ 280
0
votes
1
reply
1.8k
views
How to cluster genes based on their GO term in Arabidopsis?
GO
Cancer
Prostate
goProfiles
GO
Cancer
Prostate
goProfiles
updated 15.5 years ago by
James W. MacDonald
68k • written 15.5 years ago by
Xiaohui Wu
▴ 280
0
votes
0
replies
1.0k
views
Problem about using "goProfiles"
Category
goProfiles
Category
goProfiles
15.5 years ago
wei tie
▴ 30
0
votes
0
replies
1.3k
views
How to compare GO results
Annotation
GO
topGO
goProfiles
Annotation
GO
topGO
goProfiles
16.3 years ago
Johannes Hanson
▴ 30
0
votes
0
replies
1.2k
views
plotProfiles (goProfiles) and bitmap
GO
graph
goProfiles
GO
graph
goProfiles
16.5 years ago
Jean-Pierre Desvignes
▴ 60
0
votes
8
replies
2.5k
views
PreProcess and Limma 'done'. What directions now?
goProfiles
goProfiles
updated 16.5 years ago by
Steve Lianoglou
★ 13k • written 16.5 years ago by
Massimo Pinto
▴ 390
0
votes
2
replies
1.4k
views
namespace error with goProfiles package
GO
mouse4302
goProfiles
GO
mouse4302
goProfiles
updated 17.5 years ago by
Alex Sanchez
▴ 20 • written 17.5 years ago by
Straubhaar, Juerg
▴ 300
14 results • Page
1 of 1
Recent ...
Replies
Comment: DECIPHER DesignProbes unable to design FISH-probes
by
Erik Wright
▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment
by
Michael Love
43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment
by
Michael Love
43k
The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
Answer: PTM analysis in LIMPA
by
Gordon Smyth
53k
For PTM analysis, the usual quantification command dpcQuant() is replaced by dpcImpute(). Otherwise the limpa pipeline is the same as for a…
Answer: problem reading bam files into nucleR
by
James W. MacDonald
68k
The first step is to update to the current versions of R/Bioconductor and try again. It's possible that you have run into a bug that's alre…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
Awards
• All
Popular Question
to
James W. MacDonald
68k
Popular Question
to
Gordon Smyth
53k
Commentator
to
sina.nassiri
▴ 130
Popular Question
to
Hervé Pagès
16k
Popular Question
to
jared.andrews07
▴ 30
Locations
• All
United States,
4 minutes ago
Seattle, WA, United States,
41 minutes ago
United States,
2 hours ago
Barcelona, Spain,
3 hours ago
United States,
4 hours ago
Traffic: 1385 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6