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grange
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0
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865
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Error in Medips MEDIPS.CpGenrich()
software error
Grange
RangedData
5.8 years ago
mawusse.agbessi
• 0
2
votes
0
replies
1.2k
views
SOLVED. finding distance to nearest neighbour (non-self) within a list in GenomicRanges
GenomicRanges
GenomicFeatures
grange
distanceToNearest
R
6.1 years ago
rmash
▴ 20
0
votes
1
reply
927
views
Multi-sample Heatmap from GRange
GRange
updated 7.1 years ago by
James W. MacDonald
68k • written 7.1 years ago by
Danny
• 0
0
votes
3
replies
3.4k
views
Selecting columns form a list of grange objects
r
granges
grange
7.3 years ago
g.k
• 0
1
vote
3
replies
1.5k
views
GRange and bam files
bioconductor
Grange
7.6 years ago
Merlin
▴ 10
0
votes
1
reply
1.3k
views
Detect Sites with Minimum Gap in GRanges Object
R
genomicranges
granges
grange
7.7 years ago
g.k
• 0
1
vote
2
replies
2.4k
views
Detecting Overlaps within Grange Object
r
grange
granges
iranges
updated 7.8 years ago by
Michael Lawrence
★ 11k • written 7.8 years ago by
g.k
• 0
3
votes
4
replies
6.3k
views
GenomicRanges: Take union of GRanges and keep metadata?
GRange
genomicranges
updated 9.3 years ago by
Martin Morgan
25k • written 9.3 years ago by
endrebak85
▴ 40
1
vote
2
replies
2.9k
views
Extract GRanges for gene data frame
GRange
updated 9.4 years ago by
Martin Morgan
25k • written 9.4 years ago by
mdeea123
▴ 10
9
votes
21
replies
13k
views
annotate GRanges with upstream or downstream nearest gene
GRange
genomicranges
genomicfeatures
updated 10.0 years ago by
Ou, Jianhong
★ 1.3k • written 10.0 years ago by
tangming2005
▴ 200
0
votes
1
reply
1.4k
views
summarizeOverlaps on partial BAM file?
GenomicFeatures
GRange
Rsamtools
updated 10.9 years ago by
Valerie Obenchain
★ 6.8k • written 10.9 years ago by
cidster12
• 0
4
votes
2
replies
1.6k
views
about INCLUSIVE INTERSECTION of GRANGES
Grange
11.1 years ago
Bogdan
▴ 670
12 results • Page
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Answer: Limma-voom sample weights and impact on DEG numbers
by
Gordon Smyth
53k
I recommend that you always use voomLmFit() instead of the earlier voom() or voomWithQualityWeights() functions. Personally, I would use sa…
Votes
Error in SummarizedExperiment(assays = SimpleList(counts = countData)
Answer: DESeq2 class error: superclass "ExpData" not defined in the environment of the o
Limma-voom sample weights and impact on DEG numbers
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
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