Bioconductor Hg19

Showing : hg19 • reset

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1.3k

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annotation hg19

19 months ago pcantalupo ▴ 10

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2.5k

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genomeinfodb hg19 ucsc seqlevel genomicfeatures

updated 5.8 years ago by James W. MacDonald 68k • written 5.8 years ago by foehn ▴ 100

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1.8k

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hg19 liftover matrixeqtl DMRcate

updated 6.6 years ago by James W. MacDonald 68k • written 6.6 years ago by yoursbassanio ▴ 10

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1.6k

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bsgenome.hsapiens.ucsc.hg19 hg19

updated 8.2 years ago by Mike Smith ★ 6.6k • written 8.2 years ago by addyS • 0

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1.7k

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omiccircos bug hg19 hg18 data

8.7 years ago matthew.bashton • 0

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3.7k

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ucsc ucsctrack ggbio Gviz hg19

updated 8.9 years ago by maximilianh ▴ 10 • written 8.9 years ago by metamaden ▴ 10

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1.7k

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biomart hg19

9.3 years ago Stephane Plaisance | VIB | ▴ 60

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1.5k

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bsgenome hg19

updated 10.3 years ago by Martin Morgan 25k • written 10.3 years ago by Lakshmanan Iyer ▴ 250

8 results • Page 1 of 1

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Comment: Limma-voom sample weights and impact on DEG numbers by A.Barden ▴ 20

Apologies for the late response - thank you for this information, it is very helpful.

Comment: Converting Probe IDs to HGNC symbols by Manav ▴ 10

ah thank u so much

Comment: Guitar R package requires update due to dependency GenomicFeatures by Sean Davis 21k

A great way to communicate such a nice troubleshooting and bug fix hint is to file an issue in github: https://github.com/lzcyzm/Guitar/iss…

Answer: Converting Probe IDs to HGNC symbols by Sean Davis 21k

The brainarray annotations are very confusing, as the IDs in the fData look like affymetrix probe IDs. To clarify, the brainarray project m…

Comment: How to do differential expresion across time serise with edgeR? by Gordon Smyth 53k

If you have fake replicates, then I think my code answers your question about how to run the edgeR time-course analysis. Regarding tutoria…

Votes

Answer: Limma-voom sample weights and impact on DEG numbers

Answer: Converting Probe IDs to HGNC symbols

Converting Probe IDs to HGNC symbols

Answer: How to install packages such as TCGAbiolinks, SumarizedExperiment?

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