Showing : lfc • reset
0
votes
7
replies
2.2k
views
LRT test followed by filtering based on LFC
deseq2 LFC LRT
written 6.9 years ago by • 0
1
vote
1
reply
1.3k
views
Gene wise dispersion estimate Process - From the prior to the posterior
GLM prior DESeq LFC
updated 3.5 years ago by 43k • written 3.5 years ago by • 0
0
votes
1
reply
1.7k
views
Filtering DESeq2 results for | LFC | > 1 genes
RNAseq LFC DEseq
4.6 years ago ayy2110 • 0
0
votes
6
replies
2.4k
views
large range of LFC in DESeq2
deseq2 lfc betaprior
updated 3.1 years ago by 43k • written 7.1 years ago by • 0
17
votes
7
replies
16k
views
DESeq2 lfcShrink() usage of coef vs. usage of contrast
deseq2 lfc coef contrast
updated 8.4 years ago by 43k • written 8.4 years ago by ▴ 10
6
votes
4
replies
3.6k
views
Identification of DEGs through limma analysis
limma microarray DEGs p values lfc
8.5 years ago rkp • 0
4
votes
14
replies
22k
views
standard error value (lfcSE) returned by DeSeq2
deseq2 deseq lfc lfcse standard error
updated 8.7 years ago by • 0 • written 8.8 years ago by • 0
2
votes
1
reply
3.0k
views
Using Limma to identify any differences between multiple treatment groups (without making pairwise comparisons)
microarray limma multiple treatments lfc
updated 9.6 years ago by ★ 29k • written 9.6 years ago by • 0
8 results • Page 1 of 1
Recent ...
Replies
Comment: EuroBioC2026 abstract submission is open! by TikTsokaasocissalpc • 0
Submitting abstracts for EuroBioC2026 can be exciting but organizing ideas is key. A Random Word Generator [visit][1] can help create uniqu…
Comment: DESeq2 on non-RNASeq counts data by TikTsokaasocissalpc • 0
In data analysis, behavior differences based on data type are common. Similarly, Best EDI Software adapts to non-standard transaction volum…
Comment: blockwiseModule crashes in the end and doesn't generate modules by gexose2839 • 0
Sounds good. @[time][1] [1]: https://timeduration.github.io
Comment: PFAM formats changed - is it still possible to use this with ISA? by TikTsokaasocissalpc • 0
For mobile gaming enthusiasts, 3 Patti Lucky offers a seamless experience, unlike the frustration Harris faced with incompatible PFAM resul…
Answer: segfault in edgeR glmQLFit by Gordon Smyth 53k
Dear Mark, Thank you for providing a reproducible example. I confirm that I can reproduce the segfault myself on my own computer. The prob…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
Awards • All
Popular Question to Gordon Smyth 53k
Popular Question to Vincent J. Carey, Jr. 6.7k
Popular Question to Istvan Albert ▴ 50
Popular Question to Dario Strbenac ★ 1.6k
Scholar to Nikos Ignatiadis ▴ 180
Locations • All
Germany, 29 minutes ago
United States, 56 minutes ago
Pakistan, 1 hour ago
Barcelona, Spain, 1 hour ago
WEHI, Melbourne, Australia, 2 hours ago
Traffic: 615 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6