Bioconductor LiftOver

Showing : liftOver • reset

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718

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liftOver SNP GWASTools

20 months ago bonheur • 0

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2.0k

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lifto liftOver

updated 2.5 years ago by Marcel Ramos 700 • written 2.5 years ago by james.dalgleish • 0

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1.9k

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liftOver rtracklayer

updated 3.8 years ago by James W. MacDonald 67k • written 3.8 years ago by Mikhail Dozmorov ▴ 30

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1.7k

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liftOver

updated 4.0 years ago by shepherl 4.1k • written 4.0 years ago by bluepebbles • 0

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1.0k

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liftOver

4.1 years ago geneprophet • 0

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1.5k

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hg19 liftover matrixeqtl DMRcate

updated 5.5 years ago by James W. MacDonald 67k • written 5.5 years ago by yoursbassanio ▴ 10

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1.4k

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rtracklayer export.bw liftover

updated 6.0 years ago by Michael Lawrence ★ 11k • written 6.0 years ago by ang ▴ 20

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1.4k

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rtracklayer liftOver parameters minMatch

updated 6.6 years ago by Michael Lawrence ★ 11k • written 6.6 years ago by Nik dAK ▴ 10

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3.2k

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rtracklayer liftover bioconductor R

updated 7.3 years ago by Michael Lawrence ★ 11k • written 7.3 years ago by m.guelfi • 0

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1.9k

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liftover rtracklayer

updated 7.3 years ago by Michael Lawrence ★ 11k • written 7.3 years ago by beausoleilmo • 0

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2.5k

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software error liftOver workflowinstall package installation

updated 8.1 years ago by James W. MacDonald 67k • written 8.1 years ago by JustGettinStarted • 0

11 results • Page 1 of 1

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Answer: Deseq2 res Function by Michael Love 43k

> Does this mean the young and KO groups were numerators and denominators in the analysis, respectively? Read over the vignette and work…

Answer: ANOVA like approach of edgeR by Gordon Smyth 51k

You need to clarify whether interactions are present for the two factors in your study. In the two factors do not interact, then the code y…

Answer: Create Illmina bead summary data by Gordon Smyth 51k

GenomeStudio produces IDAT files that you can read using the `read.idat` function in limma. That is the recommended way to read GenomeStudi…

Comment: Help with RSEM counts: do I transpose matrix? by NB • 0

OK thank you.

Comment: Help with RSEM counts: do I transpose matrix? by James W. MacDonald 67k

You can ask here, but please read the `DESeq2` vignette first, which should answer most questions.

Votes

Answer: Deseq2 res Function

Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification

Answer: ANOVA like approach of edgeR

Comment: ANOVA like approach of edgeR

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