Bioconductor LiftOver

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liftOver SNP GWASTools

2.7 years ago bonheur • 0

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lifto liftOver

updated 3.6 years ago by Marcel Ramos 700 • written 3.6 years ago by james.dalgleish • 0

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liftOver rtracklayer

updated 4.8 years ago by James W. MacDonald 68k • written 4.9 years ago by Mikhail Dozmorov ▴ 30

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liftOver

updated 5.0 years ago by shepherl 4.2k • written 5.1 years ago by bluepebbles • 0

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liftOver

5.1 years ago geneprophet • 0

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hg19 liftover matrixeqtl DMRcate

updated 6.5 years ago by James W. MacDonald 68k • written 6.5 years ago by yoursbassanio ▴ 10

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rtracklayer export.bw liftover

updated 7.0 years ago by Michael Lawrence ★ 11k • written 7.0 years ago by ang ▴ 20

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rtracklayer liftOver parameters minMatch

updated 7.7 years ago by Michael Lawrence ★ 11k • written 7.7 years ago by Nik dAK ▴ 10

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rtracklayer liftover bioconductor R

updated 8.3 years ago by Michael Lawrence ★ 11k • written 8.3 years ago by m.guelfi • 0

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liftover rtracklayer

updated 8.4 years ago by Michael Lawrence ★ 11k • written 8.4 years ago by beausoleilmo • 0

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software error liftOver workflowinstall package installation

updated 9.2 years ago by James W. MacDonald 68k • written 9.2 years ago by JustGettinStarted • 0

11 results • Page 1 of 1

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Comment: Question about RE-agnostic mode for intact Hi-C and Micro-C normalization(HiCDCP by TikTsoksocissalpc • 0

Normalizing complex datasets like Hi C can be challenging, much like setting up a PC for optimal gaming performance. Just as careful tuning…

Comment: p.adjust BH Question by TikTsoksocissalpc • 0

Thanks for sharing your question about RMA limma analysis While working on your experiment, it s always helpful to have some background mu…

Answer: NUPOP usage by shepherl 4.2k

You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…

Comment: How can I correctly use phyloseq with Docker? by fnfgame • 0

In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …

Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150

Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?

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C: DESeq2 Following RSEM

Upcoming Ensembl API and data access changes - new blog post available

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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