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minfidataepic
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Can MethylationEPIC v1 and v2 data be used together for analysis with minfi?
minfi
minfiDataEPIC
11 days ago
Felix
• 0
0
votes
1
reply
238
views
Error in reading my csv file in minfi
minfiDataEPIC
minfi
updated 3 months ago by
Basti
▴ 750 • written 3 months ago by
Ana
• 0
0
votes
1
reply
385
views
Create design matrix for differential methylation analysis
Annotation
annotate
DifferentialMethylation
minfiDataEPIC
updated 5 months ago by
Basti
▴ 750 • written 5 months ago by
titangerd
• 0
0
votes
6
replies
1.3k
views
annotation EpicV2
minfiDataEPIC
EpicV2
updated 6 months ago by
Zuguang Gu
▴ 240 • written 6 months ago by
Izabela.ams
• 0
0
votes
1
reply
338
views
Two EPIC Methylation Array Analysis Questions
minfiDataEPIC
minfi
updated 6 months ago by
James W. MacDonald
65k • written 6 months ago by
phelankj
• 0
0
votes
1
reply
2.2k
views
Warning messages in detecting P-values
minfiDataEPIC
methylationArrayAnalysis
updated 7 months ago by
ATpoint
★ 3.9k • written 7 months ago by
rae.alshammari
▴ 10
0
votes
1
reply
484
views
LmFit error in EPIC methylation array analysis, Minfi
methylationArrayAnalysis
minfi
MethylationArrayData
minfiDataEPIC
MethylationArray
updated 11 months ago by
Gordon Smyth
50k • written 11 months ago by
Grace
• 0
0
votes
1
reply
849
views
Density Plot using Noob Normalisation vs Quantile Normalisation
Quantile
noob
Normalization
minfi
minfiDataEPIC
updated 19 months ago by
James W. MacDonald
65k • written 19 months ago by
mikat
• 0
0
votes
1
reply
839
views
EPIC ARRAY ANALYSIS
minfiDataEPIC
#SexPrediction
minfi
updated 2.5 years ago by
Basti
▴ 750 • written 2.5 years ago by
nucasa
• 0
0
votes
1
reply
1.9k
views
plotSex error message
minfiData
plotsex
minfi
minfiDataEPIC
r
updated 3.1 years ago by
suman
• 0 • written 3.1 years ago by
Bethan
• 0
0
votes
2
replies
1.6k
views
Beyond dmpFinder for methylation analysis, using limma for covariates
minfiDataEPIC
arrays
limma
minfi
Epigenetics
updated 3.3 years ago by
Gordon Smyth
50k • written 3.3 years ago by
Jeff
▴ 20
11 results • Page
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Comment: Unable to annotate ExpressionSet object from hugene11st chip
by
Efra
• 0
I did as you told, and after running ```eset.annot <- annotateEset(eset, hugene11sttranscriptcluster.db)``` I got the next output: ``` 'se…
Comment: BioC2024 abstract submission is open!
by
howell
• 0
What are the conditions for approval of people in difficult circumstances? I want this scholarship
Comment: European Bioconductor Conference 2023 planning
by
william
• 0
[@MariaDoyle][1] Without a doubt. In that position, I will be included in the discussion. [1]: https://support.bioconductor.org/u/239…
Comment: Problem converting msigdb Human symbols to Zebrafish in gmt format
by
Georg
• 0
Thank you for the detailed response. The code worked right away. I appreciate the quick response.
Comment: Error in ImportRData
by
ulna
• 0
[@alastair.fortune][1][gorilla tag][2] The most recent version of IsoformSwitchAnalyzeR available on Github (v. 2.01.13) allowed me to reso…
Votes
Answer: Need help with creating and plotting temporal clustering analysis of DEGs
Answer: Problem converting msigdb Human symbols to Zebrafish in gmt format
Answer: Problem converting msigdb Human symbols to Zebrafish in gmt format
Answer: Problem converting msigdb Human symbols to Zebrafish in gmt format
A: HLA genes missing from TxDb.Hsapiens.UCSC.hg38.knownGene
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