Bioconductor Missing data

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Missing Data TCGAbiolinks Kaplan-Meier LIHC Xenabrowser

6.1 years ago jam526 • 0

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3.6k

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deseq2 sample_table missing data

updated 6.9 years ago by g.wang2 • 0 • written 10.7 years ago by anpham ▴ 70

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deseq2 paired samples missing data multiple treatments

updated 7.0 years ago by Michael Love 43k • written 7.0 years ago by greg.deakin • 0

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3.4k

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limma missing data methylation normalization

updated 8.1 years ago by Aaron Lun ★ 29k • written 8.1 years ago by mheydarpour ▴ 10

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3.0k

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limma contrast missing data lmfit makecontrasts

updated 8.3 years ago by Gordon Smyth 53k • written 8.3 years ago by wewolski ▴ 10

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pcamethods missing data

8.7 years ago eli-sava • 0

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software error rnaseq wgcna missing data

10.0 years ago • updated 9.6 years ago dvillarlozano ▴ 10

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1.3k

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cellhts2 upload missing data

updated 9.9 years ago by Joseph Barry ▴ 160 • written 9.9 years ago by zmorehouse • 0

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1.3k

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missing data filter

updated 10.0 years ago by James W. MacDonald 68k • written 10.0 years ago by rgescudero • 0

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missing data missing value imputation impute MICE bioconductor

10.2 years ago svlachavas ▴ 840

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software error missing data workflowinstall

10.6 years ago anoll2 • 0

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bayseq missing data

10.6 years ago k.w.lau • 0

12 results • Page 1 of 1

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Comment: Question about RE-agnostic mode for intact Hi-C and Micro-C normalization(HiCDCP by TikTsoksocissalpc • 0

Normalizing complex datasets like Hi C can be challenging, much like setting up a PC for optimal gaming performance. Just as careful tuning…

Comment: p.adjust BH Question by TikTsoksocissalpc • 0

Thanks for sharing your question about RMA limma analysis While working on your experiment, it s always helpful to have some background mu…

Answer: NUPOP usage by shepherl 4.2k

You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…

Comment: How can I correctly use phyloseq with Docker? by fnfgame • 0

In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …

Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150

Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?

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C: DESeq2 Following RSEM

Upcoming Ensembl API and data access changes - new blog post available

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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