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multiomics
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Job:
Job as a bioinformatician in Hamburg, Germany
DimensionReduction
SingleCellData
multiomics
MachineLearning
16 months ago
Diego's
• 0
1
vote
0
replies
754
views
Job:
Research Fellow in Prostate Cancer Proteomics (Bioinformatics/Stats/Data Analysis) - University of St Andrews
Multiomics
Proteomics
Cancer
Statistics
Bioinformatics
21 months ago
Andy Lynch
▴ 120
0
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0
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831
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Job:
Bioinformatics scientist (Full-time/Permanent) for the analysis of multiomics data in oncology
clinical
R
bioinformatics
multiomics
oncology
2.1 years ago
vincent.piras
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1.1k
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Job:
Post-doc position in multi-omics of Alzheimer's disease at Columbia University in New York City
JobPosting
postdoc
sequencing
multiomics
3.3 years ago • updated 3.2 years ago
lhd
• 0
0
votes
0
replies
820
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Job:
Postdoc/Bioinformatician: Helsinki - Obesity Research Unit, University of Helsinki
multiomics
single-cell RNA
Job
4.5 years ago
mahes.muniandy
• 0
5
votes
4
replies
1.8k
views
Perform correlation analysis between miRNA and mRNA gene expression data on the same TCGA dataset based on the curatedTCGAData
curatedTCGAData
MultiAssayExperiment
multiomics
TCGA
updated 5.1 years ago by
Levi Waldron
★ 1.1k • written 5.1 years ago by
svlachavas
▴ 830
3
votes
1
reply
1.1k
views
Horizontal integration of multi omic data, with continuous dependent variable
multiassayexperiment
multiomics
updated 5.9 years ago by
Levi Waldron
★ 1.1k • written 5.9 years ago by
dberel
▴ 20
8
votes
5
replies
1.9k
views
Querying specific TCGA datasets through the MultiAssayExperiment R package
MultiAssayExperiment
curatedCRCdata
multiomics
TCGA
updated 5.9 years ago by
Marcel Ramos
690 • written 5.9 years ago by
svlachavas
▴ 830
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Comment: log2FoldChange value is way too different when compared with counts(dds)
by
Michael Love
41k
But just to be clear, this is not the same as regressing out batch from the VST (approx log transformed): ``` limma::removeBatchEffect(cou…
Comment: log2FoldChange value is way too different when compared with counts(dds)
by
HAK
• 0
Thank you for the explanation, probably my brain just needed to accumulate enough info to understand what you are saying, but I finally got…
Answer: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
by
ATpoint
★ 4.1k
Here the error probably means that you habe genes where expression scross all samples is the same. Rowscaling is value minus mean divided b…
Comment: Store output of matchPWM()
by
James W. MacDonald
65k
Here's a self contained reproducible example, using part of the example in `?matchPWM` ``` > library(Biostrings) > data(HNF4alpha) > libr…
Comment: DEseq2 coefficient
by
JKim
• 0
Hi Dr. Love, I'm sorry to ask another question to my old post. If the design isn't balanced, the interpretation of coefficients will be…
Votes
SPIA plotP giving error
Answer: Fold change calculation in Diffbind vs. DESEQ2?
C: How to establish a subset from TxDb.Hsapiens.UCSC.hg38.knownGene DB
C: Extremely big genes in annotation TxDb packages
Make custom Txdb class objects from Txdb
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