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pcaMethods
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How do you post on this forum?
pcaMethods
11 weeks ago
yousavdj
• 0
0
votes
4
replies
1.2k
views
Error from pcaMethods and psych packages from biocLite("pcaMethods")
pcamethods
updated 7.1 years ago by
James W. MacDonald
65k • written 7.1 years ago by
allantanaka11
• 0
1
vote
3
replies
1.8k
views
PCA clusters by replicates not by study groups
pcamethods
r
8.1 years ago
stolarek.ir
• 0
0
votes
3
replies
1.2k
views
I got error when visualizing my PCA
PCAtools
pcaExplorer
pcaMethods
updated 22 months ago by
Federico Marini
▴ 150 • written 22 months ago by
m610110001
• 0
0
votes
3
replies
356
views
Biplot has a secondary x-axis and y-axis
pcaMethods
pca
updated 11 weeks ago by
James W. MacDonald
65k • written 11 weeks ago by
yousavdj
• 0
0
votes
3
replies
1.3k
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Problems with robustPca in pcaMethods
pcaMethods
pcaMethods
10.2 years ago • updated 10.1 years ago
Julian Gehring
★ 1.3k
0
votes
2
replies
1.6k
views
screeplot in package pcaMethods fails
pcaMethods
pcaMethods
updated 15.4 years ago by
Wolfgang Huber
★ 13k • written 15.4 years ago by
Yury Bukhman
▴ 20
0
votes
2
replies
2.1k
views
How to exclude outlier (Microarray ) from PCA in R
OutlierD
pcaMethods
MicroarrayData
Microarray
3.0 years ago
waiyin0923
• 0
0
votes
2
replies
1.3k
views
package R.oo (or R.00?), within package R.classes, and function robustPca
aroma.light
pcaMethods
aroma.light
pcaMethods
updated 15.6 years ago by
Sean Davis
21k • written 15.6 years ago by
Tillinghast, Guy, M.D.
▴ 30
2
votes
1
reply
1.1k
views
R package "metaboliteData" for package "pcaMethods"
metaboliteData
pcaMethods
pcamethods
r package
metabolite Data
updated 7.4 years ago by
Valerie Obenchain
★ 6.8k • written 7.4 years ago by
lukasz.galecki
▴ 10
0
votes
1
reply
758
views
Getting loadings of components from pcaMethods
pcamethods
updated 5.5 years ago by
James W. MacDonald
65k • written 5.5 years ago by
johnnytam100
• 0
0
votes
0
replies
822
views
imputing data using pcaMethods with large amounts of missing data in rows
pcamethods
missing data
7.1 years ago
eli-sava
• 0
0
votes
0
replies
809
views
Bioconductor Digest, Vol 87, Issue 17
Clustering
pcaMethods
Clustering
pcaMethods
14.0 years ago
avinash gupta
▴ 130
0
votes
0
replies
560
views
pcaMethods percent missing interpretation
pcaMethods
3.3 years ago
k.vitting.seerup
▴ 120
0
votes
0
replies
544
views
PCA theoretical question for applied case
pcaMethods
3.0 years ago
Gero
• 0
0
votes
0
replies
1.1k
views
Problems with robustPca in pcaMethods
pcaMethods
pcaMethods
10.2 years ago
Guest User
★ 13k
0
votes
0
replies
1.0k
views
Troubles installing pcaMethods on R2.12.1
pcaMethods
pcaMethods
13.1 years ago
Alfons Gonzalez
▴ 10
0
votes
0
replies
1.1k
views
Troubles installing pcaMethods on R2.12.1
pcaMethods
pcaMethods
13.2 years ago
Manca Marco PATH
▴ 340
0
votes
0
replies
1.6k
views
when to impute the missing value?
impute
pcaMethods
impute
pcaMethods
16.5 years ago
De-Jian ZHAO
▴ 240
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Comment: log2FoldChange value is way too different when compared with counts(dds)
by
Michael Love
41k
But just to be clear, this is not the same as regressing out batch from the VST (approx log transformed): ``` limma::removeBatchEffect(cou…
Comment: log2FoldChange value is way too different when compared with counts(dds)
by
HAK
• 0
Thank you for the explanation, probably my brain just needed to accumulate enough info to understand what you are saying, but I finally got…
Answer: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
by
ATpoint
★ 4.1k
Here the error probably means that you habe genes where expression scross all samples is the same. Rowscaling is value minus mean divided b…
Comment: Store output of matchPWM()
by
James W. MacDonald
65k
Here's a self contained reproducible example, using part of the example in `?matchPWM` ``` > library(Biostrings) > data(HNF4alpha) > libr…
Comment: DEseq2 coefficient
by
JKim
• 0
Hi Dr. Love, I'm sorry to ask another question to my old post. If the design isn't balanced, the interpretation of coefficients will be…
Votes
SPIA plotP giving error
Answer: Fold change calculation in Diffbind vs. DESEQ2?
C: How to establish a subset from TxDb.Hsapiens.UCSC.hg38.knownGene DB
C: Extremely big genes in annotation TxDb packages
Make custom Txdb class objects from Txdb
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