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rnaseqDTU
•
reset
2
votes
2
replies
879
views
Inconsistent Dirichlet-multinominal coefficient and Beta-Binominal coefficient for a transcript in DTU analysis.
rnaseqDTU
DRIMSeq
2.4 years ago
wangziwei0010
▴ 10
1
vote
5
replies
1.5k
views
Separate exogenous from endogenous transcripts using Salmon RNAseq DTU
rnaseqDTU
2.6 years ago • updated 2.5 years ago
ksong
▴ 10
2
votes
7
replies
1.6k
views
Fold Change for rnaseq DTU
DEXSeq
rnaseqDTU
3.3 years ago • updated 3.2 years ago
rbenel
▴ 40
0
votes
5
replies
1.5k
views
DTU analysis with tximport-DRIM-Seq-DEXSeq-stageR workflow starting from StrinTie output
RNA-seq
DRIMSeq
DEXSeq
rnaseqDTU
3.3 years ago
bioinformatic_trainee
▴ 10
0
votes
1
reply
727
views
Plotting results of rnaseqDTU
rnaseqDTU
updated 4.0 years ago by
Michael Love
42k • written 4.0 years ago by
rohitsatyam102
▴ 20
0
votes
1
reply
833
views
How to obtain the specific genelists mentioned in the RNASeq DTU workflow?
rnaseqdtu
RNASeq
DEXSeq
DESeq2
updated 4.4 years ago by
Michael Love
42k • written 4.4 years ago by
debatosh das
▴ 10
0
votes
2
replies
834
views
rnaseqDTU Workflow, Precision estimation error.
rnaseqDTU
updated 4.5 years ago by
Michael Love
42k • written 4.5 years ago by
dixit.anirudha
• 0
2
votes
2
replies
980
views
Statistics for within-condition transcript abundance comparisons
rnaseqDTU
updated 5.2 years ago by
Michael Love
42k • written 5.2 years ago by
nicog
• 0
1
vote
3
replies
1.6k
views
Visualization for DE transcripts
rnaseqdtu
5.4 years ago
rbenel
▴ 40
1
vote
1
reply
1.6k
views
rnaseqDTU log2fold change DEXSeq
DEXSeq
DTU
salmon
rnaseqDTU
foldchange
updated 5.6 years ago by
Michael Love
42k • written 5.9 years ago by
fiona.dick91
▴ 60
0
votes
11
replies
1.8k
views
Issue during transcript variant analysis using rnaseqDTU-DRIMseq-DEXseq.
rnaseqDTU
DRIMseq
DEXseq
rna-seq
5.6 years ago
saddamhusain77
• 0
16
votes
25
replies
3.7k
views
dtuScaledTPM vs lengthScaledTPM in DTU analysis
tximport
dtu
salmon
TPM
rnaseqDTU
written 5.6 years ago by
fiona.dick91
▴ 60
2
votes
4
replies
1.9k
views
stageR: Error in stageWiseAdjustment
stageR
rnaseqDTU
DRIMSeq
DEXSeq
5.8 years ago
d-joester
▴ 20
2
votes
8
replies
1.5k
views
stageR following DEXSeq two-stage analysis
rnaseqdtu
5.8 years ago
rbenel
▴ 40
3
votes
9
replies
2.6k
views
Differential transcript expression (DTE) analysis
rnaseqDTU
dtu
updated 5.8 years ago by
Michael Love
42k • written 5.8 years ago by
rbenel
▴ 40
2
votes
2
replies
1.3k
views
rnaseqDTU DTU workflow - pots-hoc Filter
DTU
DRIMSeq
rnaseqDTU
updated 5.8 years ago by
Michael Love
42k • written 5.8 years ago by
fiona.dick91
▴ 60
0
votes
3
replies
1.2k
views
Post-hoc filtering on the standard deviation in proportions
drimseq
rnaseqdtu
stager
updated 6.0 years ago by
Michael Love
42k • written 6.0 years ago by
Jack.Hearn
• 0
1
vote
5
replies
1.8k
views
Plotting Expression of Differential Transcripts plotDEXseq
DEXSeq
StageR
rnaseqDTU
updated 6.1 years ago by
Michael Love
42k • written 6.1 years ago by
rbenel
▴ 40
18 results • Page
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Answer: Unlocking Potential: NURS FPX Strategies and Insights
by
efsane_kral2000
• 0
https://diendannhansu.com/threads/hayal-sohbet-odalari.667004/ https://forum.realdigital.org/u/serkan https://animefagos.com/miembros/ser…
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efsane_kral2000
• 0
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Comment: Is it recommended to analyze different tissues together when using edgeR
by
Gordon Smyth
51k
Just plot the samples with plotMDS(). Alternatively you would use `voomLmFit()` with `sample.weights=TRUE` or `var.group=tissue`. In princ…
Comment: Handling Epic Array Data
by
Melisa Tecik
• 0
Thanks a lot for the help. You saved my day
Answer: Differene between the Wald and LRT test for time-series gene expression data
by
James W. MacDonald
67k
The advantage to using the LRT is that it's an omnibus test that tells you if there are changes at any time point. If you have lots of time…
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Answer: Using voom-transformed counts for unsupervised analyses (PCA, Random Forest, Ela
Answer: Allele frequencies for ALL alleles of one SNP ?
Answer: Is it recommended to analyze different tissues together when using edgeR
Answer: Is it recommended to analyze different tissues together when using edgeR
Answer: Using Affymetrix Custom Array
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