Bioconductor RnaseqDTU

Showing : rnaseqDTU • reset

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871

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rnaseqDTU DRIMSeq

2.3 years ago wangziwei0010 ▴ 10

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1.5k

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rnaseqDTU

2.6 years ago • updated 2.5 years ago ksong ▴ 10

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1.6k

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DEXSeq rnaseqDTU

3.2 years ago rbenel ▴ 40

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1.5k

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RNA-seq DRIMSeq DEXSeq rnaseqDTU

3.2 years ago bioinformatic_trainee ▴ 10

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715

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rnaseqDTU

updated 4.0 years ago by Michael Love 42k • written 4.0 years ago by rohitsatyam102 ▴ 20

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826

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rnaseqdtu RNASeq DEXSeq DESeq2

updated 4.4 years ago by Michael Love 42k • written 4.4 years ago by debatosh das ▴ 10

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828

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rnaseqDTU

updated 4.5 years ago by Michael Love 42k • written 4.5 years ago by dixit.anirudha • 0

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971

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rnaseqDTU

updated 5.2 years ago by Michael Love 42k • written 5.2 years ago by nicog • 0

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1.6k

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rnaseqdtu

5.4 years ago • updated 5.3 years ago rbenel ▴ 40

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1.5k

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DEXSeq DTU salmon rnaseqDTU foldchange

updated 5.5 years ago by Michael Love 42k • written 5.8 years ago by fiona.dick91 ▴ 60

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1.8k

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rnaseqDTU DRIMseq DEXseq rna-seq

5.6 years ago saddamhusain77 • 0

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3.6k

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tximport dtu salmon TPM rnaseqDTU

written 5.6 years ago by fiona.dick91 ▴ 60

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1.9k

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stageR rnaseqDTU DRIMSeq DEXSeq

5.8 years ago d-joester ▴ 20

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1.5k

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rnaseqdtu

5.8 years ago rbenel ▴ 40

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2.5k

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rnaseqDTU dtu

updated 5.8 years ago by Michael Love 42k • written 5.8 years ago by rbenel ▴ 40

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1.3k

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DTU DRIMSeq rnaseqDTU

updated 5.8 years ago by Michael Love 42k • written 5.8 years ago by fiona.dick91 ▴ 60

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1.2k

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drimseq rnaseqdtu stager

updated 5.9 years ago by Michael Love 42k • written 5.9 years ago by Jack.Hearn • 0

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1.8k

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DEXSeq StageR rnaseqDTU

updated 6.0 years ago by Michael Love 42k • written 6.1 years ago by rbenel ▴ 40

18 results • Page 1 of 1

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Comment: Problem at champ.load by andrew.gibbons • 0

I'd love to know if anyone has a workaround too. I've tried rolling back ChAMP and R to the previous versions that others have said work wi…

Comment: ESTMATE, MCPcounter, EPIC, xCell input by Kang • 0

These are not, as far as I know, bioconductor packages. You should query on the websites for those specific software programs. @[mapquest][…

Comment: Robust way of dealing with low number of samples for Differential Gene Expressio by Kang • 0

I believe that pseudo-bulking is a strong way to approach DE, as long as it is possible to reliably identify the cell type across data and …

Comment: GOstats kegg analysis in wheat - help - none of the objects in the first column by GV Yoshikawa • 0

Thank you for the reply. I tried swapping columns before asking, it made no difference. head(keggframeData) path_id kegg…

Answer: Differential Expression Analysis with unbalanced batches without replication bet by Gordon Smyth 51k

> Is there an alternative model or approach in tools like edgeR, limma-voom, or DESeq2 or any other that can handle confounded batch effect…

Votes

A: Up/Down Regulated GeneList from edgeR and R

A: Down/Up-regulated genes asymmetry in edgeR differential expression analysis

Answer: Combining RNAseq and microarray data using edgeR/limma-voom

Answer: How do I merge a list of GRanges?

Awards • All

Teacher to Gordon Smyth 51k

Popular Question to Guido Hooiveld ★ 4.1k