Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
ruvnormalize
•
reset
1
vote
0
replies
328
views
RUVg spike-in assumption global expression
RUVSeq
RUVnormalize
6 months ago
Erdi
▴ 10
0
votes
0
replies
321
views
determine k during RUVSeq
RUVSeq
RUVnormalize
8 months ago
Ειρήνη
• 0
1
vote
2
replies
1.2k
views
Removing Unwanted Variations
DESeq2
NanoStringNCTools
RUVnormalize
RUVSeq
DifferentialExpression
22 months ago • updated 21 months ago
AZ
▴ 30
0
votes
4
replies
2.9k
views
Confused about using RUVg in getting negative control genes using RUVg
RUVnormalize
R
edgeR
RUVSeq
RUVnormalizeData
2.6 years ago
Mohamed
▴ 30
0
votes
1
reply
753
views
Is RUVnormalize applicable to small dataset?
RUVnormalize
protein mi
6.3 years ago
losik
• 0
0
votes
2
replies
1.2k
views
RUVnormalize- How to output a corrected expression matrix without negative values to use for DEG analysis(i.e. limma) ?
RUVnormalize
limma
corrected expression matrix
microarray
updated 7.1 years ago by
Dario Strbenac
★ 1.5k • written 7.1 years ago by
massimo.acquaviva.78
• 0
2
votes
9
replies
3.0k
views
Zero inflation in RUV normalization and DE for single cell data
ruv
ruvseq
ruvnormalize
single-cell
zero-inflated
updated 7.5 years ago by
davide risso
▴ 980 • written 7.5 years ago by
Nik Tuzov
▴ 90
1
vote
3
replies
2.8k
views
Does it make sense to consider RUVr normalization for single cell RNA analysis?
RUV
ruvseq
ruvr
ruvnormalize
single cell
7.5 years ago
Nik Tuzov
▴ 90
2
votes
1
reply
1.5k
views
Decide normalisation method in RUVseq for RNAseq data
edger
ruvseq
rnaseq
normalization
ruvnormalize
updated 7.6 years ago by
davide risso
▴ 980 • written 7.6 years ago by
manish20072013
• 0
2
votes
1
reply
1.8k
views
RUVSeq empirical negative controls? how many to take to find the span set
ruvseq
RUV
ruvnormalize
ruvg
8.6 years ago
anthonycolombo60
• 0
2
votes
6
replies
1.8k
views
effect of polyploidy level on RUVs normalisation
normalization
ruvseq
ruvnormalize
ruvs eda
8.8 years ago
thomas.wolfe
• 0
0
votes
0
replies
1.5k
views
Technical Replicates and RUVs Normalisation
rnaseq
ruvnormalize
normalization
technical replicates
9.2 years ago
thomas.wolfe
• 0
1
vote
1
reply
1.5k
views
RUVnormalize- should input be pre-normalized?
ruvnormalize
microarray
normalization
updated 9.6 years ago by
laurent.jacob
▴ 10 • written 9.6 years ago by
Cornwell, Adam
▴ 110
2
votes
1
reply
1.4k
views
naiveRandRUV Error When k is 1
RUVNormalize
Subsetting
updated 9.6 years ago by
laurent.jacob
▴ 10 • written 9.7 years ago by
Dario Strbenac
★ 1.5k
14 results • Page
1 of 1
Recent ...
Replies
Comment: Unused arguments error without used arguments in GSVA?
by
1sunmic2
• 0
It was due to the comma. Thank you!
Answer: Unused arguments error without used arguments in GSVA?
by
Axel Klenk
★ 1.1k
Hi, here is a good place to ask questions when encountering problems with GSVA. I cannot reproduce this behaviour with the current release…
Answer: Restricting differential binding analysis to only TSS-proximal regions
by
Aaron Lun
★ 28k
Seems reasonable to filter out windows outside of the TSS if you don't care about those events. IIRC the `discard` option will ignore any f…
Comment: Sample-specific methylation values using QSEA
by
User3088
• 0
Thanks Simon. I got the sample-specific methylation values by using '**samples=getSampleNames**' ``` result=makeTable(qs=prad_QSEAset, glm=…
Comment: input for singR function
by
iamin053
• 0
Hi Paria, I'm wondering if you were able to get an answer on this please. I would greatly appreciate any comments!
Votes
Answer: Unused arguments error without used arguments in GSVA?
Answer: Unused arguments error without used arguments in GSVA?
Answer: Unused arguments error without used arguments in GSVA?
Unused arguments error without used arguments in GSVA?
Answer: Is it always preferable to recount library sizes of DGEList object in edgeR afte
Awards
• All
Teacher
to
Axel Klenk
★ 1.1k
Popular Question
to
shepherl
4.1k
Popular Question
to
Gordon Smyth
52k
Popular Question
to
bastien_chassagnol
• 0
Popular Question
to
Maria Doyle
▴ 100
Locations
• All
United States,
5 minutes ago
WEHI, Melbourne, Australia,
10 minutes ago
UPF, Barcelona, Spain,
33 minutes ago
United States,
41 minutes ago
United States,
1 hour ago
Traffic: 443 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6