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News:
Note about packages submitted for Bioconductor 3.19
Release
Submission
release
Bioconductor
12 weeks ago
shepherl
3.8k
0
votes
0
replies
791
views
News:
New Package Submission Deadline for Bioc Release 3.14
newpackage
Deadline
Release
Submission
2.6 years ago
shepherl
3.8k
0
votes
2
replies
876
views
Confusion error from automated checks for package submission
package
submiss
Submission
updated 3.0 years ago by
Hervé Pagès
16k • written 3.0 years ago by
sara.stankiewicz
• 0
1
vote
1
reply
861
views
Recommended logging/logger for bioconductor package submission.
Submission
updated 3.0 years ago by
Lluís Revilla Sancho
▴ 730 • written 3.0 years ago by
MatthaeusCaesar
• 0
0
votes
1
reply
1.0k
views
News:
Bioconductor 3.13 New Package Submission Deadline
release
Submission
newpackage
Release
Deadline
3.0 years ago
shepherl
3.8k
1
vote
0
replies
984
views
News:
New Package Submission Deadline for Bioc Release 3.12
release
new package
submission
deadline
News
3.6 years ago
shepherl
3.8k
0
votes
3
replies
1.1k
views
News:
New Package Submission Workflow Updates!
new packages
submission
bioconductor
News
updated 2.8 years ago by
jonathan.dekermanjian
• 0 • written 3.8 years ago by
shepherl
3.8k
2
votes
2
replies
849
views
Does the 10 minute CMD check time limit include unit testing?
new package
submission
4.4 years ago
Krutik Patel
▴ 10
0
votes
0
replies
622
views
News:
Single Package Builder for New Package Submissions
new package
submission
release
News
4.4 years ago
shepherl
3.8k
1
vote
1
reply
663
views
Is ECIS Data within BioConductor's remit?
Submission
ECIS
Bioconductor Scope
updated 4.6 years ago by
Martin Morgan
25k • written 4.6 years ago by
jhuc964
▴ 10
0
votes
1
reply
1.3k
views
How to submit a package hosted on Bitbucket
package
submission
updated 7.6 years ago by
Martin Morgan
25k • written 7.6 years ago by
richierocks
▴ 40
1
vote
0
replies
4.0k
views
News:
New Package Submission Process
submission
News
7.9 years ago
Dan Tenenbaum
★ 8.2k
7
votes
6
replies
2.0k
views
Help to find Volunteer who can review my bioconductor package before submission ?
r packages
submission
8.2 years ago
Jurat Shahidin
▴ 80
13
votes
1
reply
2.9k
views
News:
Updated Bioconductor Package Submission Policy
package
submission
News
8.3 years ago
Martin Morgan
25k
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Answer: Dominance Index for Shotgun Metagenomics Data
by
Leo Lahti
▴ 40
1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
pl23
• 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions
by
Michael Love
41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
by
ussarizona
▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative?
by
Michael Love
41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
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Answer: Dominance Index for Shotgun Metagenomics Data
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
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