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Gordon Smyth
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Subread FeatureCounts for Exon level quantification: Length estimate for Exons as low as 1 base-pair
updated 5.8 years ago by
Gordon Smyth
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written 5.8 years ago by
jennyl.smith12
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written 5.0 years ago by
aurel.nagy
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updated 5.0 years ago by
Gordon Smyth
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written 5.0 years ago by
Jonathan Griffiths
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updated 4.8 years ago by
Gordon Smyth
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written 4.8 years ago by
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updated 4.7 years ago by
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updated 21 months ago by
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2.0 years ago • updated 24 months ago
Sarah_piggy
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updated 2.7 years ago by
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updated 5.2 years ago by
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written 5.2 years ago by
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Comment: Deseq2. decontXcounts not integers. Useful alternative?
by
ATpoint
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4.0k
I do not know this decontamination tool you use but generally:
If these counts are basically "corrected" raw counts in the sense that they'…
Answer: Improving the design matrices vignette in RNAseq123
by
Gordon Smyth
50k
Thanks to Shian Su, we have confirmed that the problem in the design matrices vignette html is caused by a bug in knitr 1.44 (to do with sp…
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
winwater0928
•
0
Thank you for your comment!
I'll review my code from top to bottom.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
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James W. MacDonald
65k
So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;
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