updated 11 weeks ago by
Gordon Smyth
52k
•
written 4.8 years ago by
hollandademello
▴
20
6
votes
7
replies
3.4k
views
6
votes
10
replies
3.2k
views
updated 11 months ago by
i.atanasoai
•
0
•
written 2.1 years ago by
mohammedtoufiq91
▴
10
1
vote
2
replies
2.4k
views
updated 9 months ago by
rodrigo.duarte88
▴
40
•
written 5.4 years ago by
mohamedrefaat.1.1992
•
0
2
votes
3
replies
1.9k
views
1
vote
2
replies
939
views
4
votes
5
replies
858
views
0
votes
11
replies
800
views
updated 8 weeks ago by
Im
•
0
•
written 9 weeks ago by
brown.annaleigh
•
0
0
votes
2
replies
711
views
updated 11 months ago by
Michael Love
43k
•
written 11 months ago by
SG
•
0
0
votes
4
replies
702
views
0
votes
2
replies
660
views
11 months ago
Marianna
▴
20
1
vote
2
replies
648
views
3 months ago
georgii.vdovin
•
0
0
votes
2
replies
495
views
updated 6 months ago by
Michael Love
43k
•
written 6 months ago by
rodongo
•
0
0
votes
4
replies
486
views
0
votes
2
replies
485
views
updated 5 months ago by
Michael Love
43k
•
written 5 months ago by
oguzhankaraosmanoglu
•
0
Recent ...
Replies
Comment: Using TPM from tximport of Salmon output for singscore
by
Kent
•
0
Thanks Michael. Just out of curiosity, would you also use the same technique for things like clustering analysis or when looking at the abn…
Comment: GAGE kegg.gsets() self-signed certificate error
by
Lucas
•
0
Hello,
I ended up solving the issue by using the first strategy: Disable the SSL certificate Verification.
I used the following code to …
Comment: Clarification on GOALL / GO2ALLORFs mapping
by
DavideSant
•
0
Thank you for your answer James.
I have to disagree though, at the SGD webpage you posted there is no indication that "GO:0045719 - negati…
Comment: Guidance Needed: Best Practices for Handling Technical Replicates in RNA-seq Ana
by
Michael Love
43k
And to add to this: when you put a generic package (e.g. DESeq2) as a tag, it actually emails the maintainer.
Answer: Using TPM from tximport of Salmon output for singscore
by
Michael Love
43k
TPM is fine, I've also sometimes used TPM with some robust column scaling, e.g.:
```
sf <- DESeq2::estimateSizeFactorsForMatrix(txi$abu…
Votes
Awards
• All
Popular Question to
Luca
•
0
Popular Question to
Hervé Pagès
16k
Scholar to
Michael Love
43k
Scholar to
James W. MacDonald
68k
Popular Question to
Wolfgang RAFFELSBERGER
▴
140
Locations
• All
United States, 1 minute ago
United States, 2 minutes ago
United Kingdom, 4 minutes ago
USA, 10 minutes ago
United States, 14 minutes ago
United States, 1 minute ago
United States, 2 minutes ago
United Kingdom, 4 minutes ago
USA, 10 minutes ago
United States, 14 minutes ago
Traffic: 706 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6