Bioconductor Variantfiltering

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VariantAnnotation VariantFiltering

2.2 years ago Bogdan ▴ 670

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744

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VariantFiltering

updated 2.5 years ago by Robert Castelo ★ 3.4k • written 2.5 years ago by Andrew Beggs ▴ 90

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3.0k

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RNAseq123 VariantFiltering Alignment VariantAnnotation

updated 3.1 years ago by James W. MacDonald 68k • written 3.1 years ago by Mohamed ▴ 30

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bioconductor variantfiltering

8.3 years ago Claus.Hultschig • 0

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variantannotation variantfiltering

updated 8.8 years ago by Michael Lawrence ★ 11k • written 8.8 years ago by Bogdan ▴ 670

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VariantFiltering

10.4 years ago claire.simpson • 0

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sequencing transcription variantfiltering annotation News

10.5 years ago Matthew Ritchie ▴ 1000

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1.7k

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variantfiltering phastcons

updated 10.7 years ago by Robert Castelo ★ 3.4k • written 10.7 years ago by Stefanie Tauber ▴ 40

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VariantFiltering VariantFiltering

11.6 years ago Robert Castelo ★ 3.4k

9 results • Page 1 of 1

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Comment: Bioinformatician at the Lausanne University Hospital by TikTsokaasocissalpc • 0

The Random Word Generator in Italian is a useful tool for generating ideas and exploring new approaches, much like the innovative research …

Comment: DECIPHER DesignProbes unable to design FISH-probes by TikTsokaasocissalpc • 0

If you want to share your research progress and microbiome discoveries with colleagues or friends, [snaptroid android][1] download free mak…

Answer: Limma-voom sample weights and impact on DEG numbers by Gordon Smyth 53k

I recommend that you always use voomLmFit() instead of the earlier voom() or voomWithQualityWeights() functions. Personally, I would use sa…

Answer: wgcna module preseravtion taking too long? by ATpoint ★ 5.0k

WGCNA is not a Bioconductor package, you won't get an answer here. Consider biostars.org or the r/bioinformatics reddit. Note that 10 sampl…

Answer: Question about RE-agnostic mode for intact Hi-C and Micro-C normalization(HiCDCP by victor04052024 • 0

You write quite well, and the content is very interesting. I'll provide you a link to my page [granny 2](https://granny2.io).

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Limma-voom sample weights and impact on DEG numbers

C: DESeq2 Following RSEM

Upcoming Ensembl API and data access changes - new blog post available

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

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