Bioconductor Vignette

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SummarizedExperiment vignette

2.1 years ago BioInfoBeginnerrr • 0

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biomaRt vignette

updated 3.1 years ago by ashleymaeconard ▴ 10 • written 4.5 years ago by Russ Hyde ▴ 10

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946

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newpackage vignette installation

updated 4.5 years ago by shepherl 3.8k • written 4.5 years ago by Krutik Patel ▴ 10

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flowcore vignette software error

updated 6.6 years ago by Jiang, Mike ★ 1.3k • written 6.6 years ago by Robert Baer ▴ 70

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biocstyle vignette

updated 6.8 years ago by Andrzej Oleś ▴ 750 • written 6.8 years ago by Aaron Lun ★ 28k

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STRINGdb vignette

updated 7.0 years ago by Gregor Rot ▴ 10 • written 7.0 years ago by mwinerip • 0

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software error cellmix vignette expressionset

7.3 years ago gabor.halasz • 0

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ggbio autoplot color vignette

updated 8.2 years ago by aaron ▴ 10 • written 8.3 years ago by timothypyork • 0

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github vignette test developers

updated 8.3 years ago by Dan Tenenbaum ★ 8.2k • written 8.3 years ago by anthonycolombo60 • 0

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vignette

updated 8.8 years ago by Dan Tenenbaum ★ 8.2k • written 8.8 years ago by KB ▴ 50

10 results • Page 1 of 1

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Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0

Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …

Answer: PCA plot suggestions by Michael Love 41k

For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10

Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…

Answer: Deseq2. decontXcounts not integers. Useful alternative? by Michael Love 41k

Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…

Answer: ATACseq merge peaks by ATpoint ★ 4.0k

That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…

Votes

Answer: Math expression in shapeCustom legend in EnhancedVolcano

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length