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watermelon
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A survey of computational setups for Illumina Infinium DNA methylation EPIC array pipeline
DNAMethylation
wateRmelon
Computation
minfi
2.3 years ago
calen.p.ryan
• 0
0
votes
7
replies
1.2k
views
Getting wrong rownames of MSet object when using pfilter from watermelon
wateRmelon
Illumina EPIC
pfilter
updated 5.0 years ago by
lschal
• 0 • written 5.0 years ago by
anne-kristin.stavrum
• 0
1
vote
3
replies
1.8k
views
Combining pfilter (wateRmelon) and preprocessNoob (minfi)
wateRmelon
minfi
methylation
pfilter
preprocessNoob
updated 5.2 years ago by
tgorri
▴ 10 • written 5.2 years ago by
sara.blocquiaux
• 0
0
votes
0
replies
1.3k
views
Error in ENmix::bmiq.mc(): BMIQ estimates encountered error, try to run it again
methylation
ENmix
BMIQ
wateRmelon
5.8 years ago • updated 5.7 years ago
moldach
▴ 20
0
votes
1
reply
1.7k
views
MethylSet to MethyLumiSet
minfi
methylumi
watermelon
7.8 years ago
Tom
▴ 10
0
votes
5
replies
2.5k
views
Different errors when attempting to normalize using wateRmelon (v1.1.18)
wateRmelon
methylation
EPIC
normalization
7.9 years ago
Wade Davis
▴ 60
0
votes
2
replies
1.6k
views
Error while using BMIQ normalisation on a methylumiSet
limma
watermelon
methylumi
bmiq
updated 7.9 years ago by
tgorri
▴ 10 • written 7.9 years ago by
poojitha.stemcell
▴ 10
1
vote
2
replies
2.0k
views
QC/normalization standards for cancer studies with 450k array data
minfi
watermelon
cancer
450k
normalization
updated 9.4 years ago by
Kasper Daniel Hansen
★ 6.5k • written 9.4 years ago by
metamaden
▴ 10
0
votes
3
replies
2.3k
views
minfi getProbeInfo error ( was WateRmelon betaqn error)
watermelon
betaqn
pfilter
getProbeInfo
minfi
9.8 years ago
gctromp
▴ 10
0
votes
10
replies
2.5k
views
MethyLumiM to MethyLumiSet?
convert
lumi
methylumi
minfi
wateRmelon
convert
lumi
methylumi
minfi
wateRmelon
updated 11.0 years ago by
Tim Triche
★ 4.2k • written 11.1 years ago by
Martin Rijlaarsdam
▴ 190
10 results • Page
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Comment: Downloading Metagenomic Data with Higher Taxonomic Units
by
elozanoe
• 0
Hi! I'm facing the same problem. Is there any easy way to output relative abundances of higher taxonomic units (up to kingdom), similar to…
Answer: Unlocking Potential: NURS FPX Strategies and Insights
by
efsane_kral2000
• 0
https://diendannhansu.com/threads/hayal-sohbet-odalari.667004/ https://forum.realdigital.org/u/serkan https://animefagos.com/miembros/ser…
Comment: Unlocking Potential: NURS FPX Strategies and Insights
by
efsane_kral2000
• 0
https://www.hayalsohbet.net https://www.yerlichat.com https://www.yerlichat.net https://www.mavisim.net https://www.hayalchat.com http…
Comment: Is it recommended to analyze different tissues together when using edgeR
by
Gordon Smyth
51k
Just plot the samples with plotMDS(). Alternatively you would use `voomLmFit()` with `sample.weights=TRUE` or `var.group=tissue`. In princ…
Comment: Handling Epic Array Data
by
Melisa Tecik
• 0
Thanks a lot for the help. You saved my day
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