Bioconductor Watermelon

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980

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DNAMethylation wateRmelon Computation minfi

3.2 years ago calen.p.ryan • 0

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1.7k

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wateRmelon Illumina EPIC pfilter

updated 6.0 years ago by lschal • 0 • written 6.0 years ago by anne-kristin.stavrum • 0

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2.1k

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wateRmelon minfi methylation pfilter preprocessNoob

updated 6.2 years ago by tgorri ▴ 10 • written 6.2 years ago by sara.blocquiaux • 0

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1.6k

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methylation ENmix BMIQ wateRmelon

6.7 years ago moldach ▴ 20

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2.0k

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minfi methylumi watermelon

8.8 years ago Tom ▴ 10

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2.9k

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wateRmelon methylation EPIC normalization

8.8 years ago Wade Davis ▴ 60

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2.0k

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limma watermelon methylumi bmiq

updated 8.9 years ago by tgorri ▴ 10 • written 8.9 years ago by poojitha.stemcell ▴ 10

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2.4k

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minfi watermelon cancer 450k normalization

updated 10.3 years ago by Kasper Daniel Hansen ★ 6.5k • written 10.3 years ago by metamaden ▴ 10

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2.6k

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watermelon betaqn pfilter getProbeInfo minfi

10.7 years ago gctromp ▴ 10

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3.0k

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convert lumi methylumi minfi wateRmelon convert lumi methylumi minfi wateRmelon

updated 12.0 years ago by Tim Triche ★ 4.2k • written 12.0 years ago by Martin Rijlaarsdam ▴ 190

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Answer: Failure to download resources (MeSHDb) from AnnotationHub by shepherl 4.2k

apologies. These are contributed by someone outside the core team. On upload I did not realize they included the older Bioconductor storage…

Comment: Save the Date for EuroBioC2026 in Turku! by jamesbennettki • 0

That sounds amazing I have always wanted to visit Finland and meet others in the Bioconductor community Events like EuroBioC2026 inspire me…

Answer: "Watched Tags" are being erased rather than updated by shepherl 4.2k

This should now be resolved

Answer: Question about collapsing ASVs by genus level during DESeq2 analysis by Michael Love 43k

I'll just note that microbiome stats folks tend to use other tools than DESeq2. > several ASVs belong to the same genus but are not iden…

Answer: Integration: Paired-end vs healthy single-end from a different source by James W. MacDonald 68k

If by reprocess you mean generate libraries and re-sequence, then that's something you could do. Otherwise the biological and technical dif…

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Bioconductor 3.22 Released!

Comment: "Watched Tags" are being erased rather than updated

Comment: deseq2 filter the low counts

Answer: DESeq2 interactions

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