Bioconductor Without Replicate

Showing : without Replicate • reset

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3.7k

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limma edger timecourse without replicate voom

written 9.1 years ago by Camila Orellana ▴ 10

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943

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bsmooth without replicate dimension

7.4 years ago nilaycan • 0

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1.5k

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deseq2 time-series without replicate

updated 7.4 years ago by Michael Love 43k • written 7.4 years ago by bahlv • 0

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3.9k

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deseq2 without replicate no replicates

updated 7.6 years ago by Michael Love 43k • written 7.6 years ago by Tony • 0

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6.5k

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diffbind bioconductor differential binding analysis without replicate chipseq

8.1 years ago Hesh ▴ 10

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3.1k

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edger differential gene expression without replicate nested design help

updated 9.5 years ago by Aaron Lun ★ 29k • written 9.5 years ago by knipehf • 0

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2.0k

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edgeR differential expression without replicate

9.5 years ago gavin.oliver • 0

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1.8k

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diffbind without replicate

updated 9.7 years ago by Gord Brown ▴ 670 • written 9.7 years ago by yiweihe • 0

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3.4k

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edger without replicate

updated 10.0 years ago by Yunshun Chen ▴ 900 • written 10.0 years ago by Sushant Pawar • 0

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1.7k

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edger without replicate

updated 10.0 years ago by Aaron Lun ★ 29k • written 10.0 years ago by Sushant Pawar • 0

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5.7k

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without Replicate deseq2

updated 4.4 years ago by Michael Love 43k • written 10.0 years ago by Sushant Pawar • 0

11 results • Page 1 of 1

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Comment: Bioinformatician at the Lausanne University Hospital by eja.ger.m • 0

For individuals looking to improve communication and collaboration in demanding medical or research environments like the Genetic Medicine …

Answer: NUPOP usage by shepherl 4.2k

You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…

Comment: How can I correctly use phyloseq with Docker? by fnfgame • 0

In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …

Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150

Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k

BTW, I tested with no issue on MacOS ARM on our previous github issue.

Votes

C: DESeq2 Following RSEM

Upcoming Ensembl API and data access changes - new blog post available

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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Popular Question to Lluís Revilla Sancho ▴ 760

Popular Question to James W. MacDonald 68k