Bioconductor Without replicate

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3.8k

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limma edger timecourse without replicate voom

written 9.1 years ago by Camila Orellana ▴ 10

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949

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bsmooth without replicate dimension

7.4 years ago nilaycan • 0

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1.5k

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deseq2 time-series without replicate

updated 7.4 years ago by Michael Love 43k • written 7.4 years ago by bahlv • 0

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3.9k

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deseq2 without replicate no replicates

updated 7.6 years ago by Michael Love 43k • written 7.6 years ago by Tony • 0

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6.5k

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diffbind bioconductor differential binding analysis without replicate chipseq

8.1 years ago Hesh ▴ 10

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3.1k

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edger differential gene expression without replicate nested design help

updated 9.5 years ago by Aaron Lun ★ 29k • written 9.5 years ago by knipehf • 0

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2.0k

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edgeR differential expression without replicate

9.5 years ago gavin.oliver • 0

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1.8k

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diffbind without replicate

updated 9.8 years ago by Gord Brown ▴ 670 • written 9.8 years ago by yiweihe • 0

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3.4k

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edger without replicate

updated 10.0 years ago by Yunshun Chen ▴ 900 • written 10.0 years ago by Sushant Pawar • 0

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1.7k

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edger without replicate

updated 10.0 years ago by Aaron Lun ★ 29k • written 10.0 years ago by Sushant Pawar • 0

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5.7k

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without Replicate deseq2

updated 4.4 years ago by Michael Love 43k • written 10.0 years ago by Sushant Pawar • 0

11 results • Page 1 of 1

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Comment: blockwiseModule crashes in the end and doesn't generate modules by gexose2839 • 0

Sounds good. @[time][1] [1]: https://timeduration.github.io

Comment: PFAM formats changed - is it still possible to use this with ISA? by TikTsokaasocissalpc • 0

For mobile gaming enthusiasts, 3 Patti Lucky offers a seamless experience, unlike the frustration Harris faced with incompatible PFAM resul…

Answer: segfault in edgeR glmQLFit by Gordon Smyth 53k

Dear Mark, Thank you for providing a reproducible example. I confirm that I can reproduce the segfault myself on my own computer. The prob…

Answer: DESeq2 - how many surrogate variables from svaseq, use of lfcshrink by aqeel • 0

Discover the pinnacle of Brazilian Jiu Jitsu gear at [Dragon][1] GI. [1]: https://dragongi.com/

Comment: How does contrasts.fit do in limma to extract comparisons with a model having in by Gordon Smyth 53k

I refered you to the DiffVar package 11 months ago. Did you consider it? Your clarification makes it clear that your issue is not with lim…

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C: DESeq2 Following RSEM

Upcoming Ensembl API and data access changes - new blog post available

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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