Bioconductor Without replicate

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3.6k

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limma edger timecourse without replicate voom

written 8.8 years ago by Camila Orellana ▴ 10

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867

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bsmooth without replicate dimension

7.2 years ago nilaycan • 0

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1.4k

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deseq2 time-series without replicate

updated 7.2 years ago by Michael Love 43k • written 7.2 years ago by bahlv • 0

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3.8k

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deseq2 without replicate no replicates

updated 7.3 years ago by Michael Love 43k • written 7.3 years ago by Tony • 0

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6.3k

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diffbind bioconductor differential binding analysis without replicate chipseq

7.8 years ago Hesh ▴ 10

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3.0k

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edger differential gene expression without replicate nested design help

updated 9.2 years ago by Aaron Lun ★ 29k • written 9.2 years ago by knipehf • 0

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1.9k

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edgeR differential expression without replicate

9.2 years ago gavin.oliver • 0

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1.7k

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diffbind without replicate

updated 9.5 years ago by Gord Brown ▴ 670 • written 9.5 years ago by yiweihe • 0

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3.3k

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edger without replicate

updated 9.7 years ago by Yunshun Chen ▴ 900 • written 9.7 years ago by Sushant Pawar • 0

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1.7k

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edger without replicate

updated 9.8 years ago by Aaron Lun ★ 29k • written 9.8 years ago by Sushant Pawar • 0

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5.5k

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without Replicate deseq2

updated 4.2 years ago by Michael Love 43k • written 9.8 years ago by Sushant Pawar • 0

11 results • Page 1 of 1

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Comment: Visualization of Functional Enrichment Result with enrichplot: How to control la by zhaoqiansun0592 • 0

Wow, this is super helpful! I always struggle with label sizes in enrichplot. Glad to see a solution using gginnards([Pasjans][1]) and ggre…

Comment: Could we detect difference at pathway level but not significant different at gen by zhaoqiansun0592 • 0

Interesting question! It's cool that ChatGPT4 gave such a helpful answer. I've also been wondering if pathways([space waves][1]) can show d…

Comment: Perform gene set enrichment analysis using fgsea on two conditions that don't ha by zhaoqiansun0592 • 0

Good to know there are workarounds for these tricky [doodle baseball][1]! Thanks for sharing the tips! [1]: https://doodle-baseball.cc/

Comment: GO.db and others package Download failure by James W. MacDonald 68k

Also, you never need to use anything but `BiocManager::install` to install any package, which has the beneficial side effect of ensuring th…

Comment: GO.db and others package Download failure by James W. MacDonald 68k

Yes. Your packages have odd Y version numbers (where the version is X.Y.Z). That means they are devel packages (release versions have even …