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Why does GSEA on edgeR results for randomized samples give highly significant p-values?
fgsea
edgeR
4 days ago • updated 22 hours ago
gene_bioconductor
▴ 10
4
votes
9
replies
404
views
Memory errors using read.bismark?
dmrseq
bsseq
26 days ago • updated 27 minutes ago
Juan Higareda
• 0
3
votes
4
replies
138
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Help with running egsea()
EGSEA
21 hours ago • updated 18 hours ago
Chris
• 0
1
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0
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203
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Bioc204
6 weeks ago • updated 22 hours ago
shepherl
3.9k
1
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3
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219
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Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it does not happen in Linux
GenomAutomorphism
updated 17 hours ago by
Hervé Pagès
16k • written 1 day ago by
robersy
• 0
0
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34
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2.6k
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How to use bootRanges to bootstrap small RNA loci (nullranges package)
bootRanges
nullranges
15 months ago • updated 18 hours ago
Poonam
• 0
0
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0
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19
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need help with Diffbind multiple groups
DiffBind
ChIPSeqData
17 hours ago
Dinesh
• 0
0
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3
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96
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Couldn't connect to server while using "pathways"
graphite
updated 20 hours ago by
Michael Love
42k • written 1 day ago by
fduguchunhui
• 0
0
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1
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35
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Recovering my account credentials on Bioconductor
Bioconductor
updated 4 hours ago by
shepherl
3.9k • written 5 hours ago by
cyril.dalmasso
• 0
0
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34
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minfi latest update for EPIC V2 chip
minfi
minfiDataEPIC
updated 3 hours ago by
James W. MacDonald
65k • written 8 hours ago by
e1271094
• 0
0
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1
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25
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meffil.snp.concordance
MethylationArray
methylationArrayAnalysis
MethylationArrayData
meffil
methylation
updated 2 hours ago by
James W. MacDonald
65k • written 6 hours ago by
kyj2226
• 0
0
votes
0
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8
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Extremely small p-values using Limma for proteomic data
Proteomics
limma
1 hour ago
Abbey
• 0
0
votes
3
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3.7k
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[Mfuzz] Error in cmeans(exprs(eset)
Mfuzz
Mfuzz
updated 20 hours ago by
Caio
• 0 • written 13.1 years ago by
boczniak767
▴ 720
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Comment: Memory errors using read.bismark?
by
Juan Higareda
• 0
Thanks a lot Peter, We solved the problem, IT had implemented a policy of RAM usage that started a conflict with any RAM-hungry process, m…
Answer: meffil.snp.concordance
by
James W. MacDonald
65k
This support site is meant to help people with technical questions about Bioconductor packages. The `meffil` package is not Bioconductor, n…
Answer: minfi latest update for EPIC V2 chip
by
James W. MacDonald
65k
Zuguang Gu submitted both of those packages as part of the current release, and I submitted a PR for `minfi` so it will now distinguish the…
Answer: Recovering my account credentials on Bioconductor
by
shepherl
3.9k
As we will need to exchange some information can you please contact me at bioconductorcoreteam@gmail.com and I can better assist you. Che…
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
Hervé Pagès
16k
Indeed. Calculations involving floating point arithmetic are architecture-dependent, and testing the results should be done with `all.equal…
Votes
Answer: How to save the DEXSeq results
Answer: minfi support of illumina Infinium methylationEPIC v2.0
Comment: minfi support of illumina Infinium methylationEPIC v2.0
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Help with running egsea()
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