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6
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Processing of curatedmetagenomics
curatedMetagenomicData
31 minutes ago
Edward
• 0
0
votes
0
replies
16
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LRT, more than two conditions and pairwise comparisons
DESeq2
8 hours ago
boczniak767
▴ 720
0
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0
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14
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How to run allelic imbalance in apeglm
apeglm
8 hours ago
euge.eugenio
▴ 20
0
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0
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23
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scRNA-seq data trained model can be used for predictions on bulk RNA-seq data?
RNASeq
scRNAseq
15 hours ago • updated 14 hours ago
Bibi
• 0
0
votes
0
replies
33
views
ERROR; return code from pthread_create() is 22
affy
1 day ago • updated 18 hours ago
pickingastar
• 0
0
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0
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38
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Minor allele data from grch38 giving NAs from getBM ?
BioMartGOGeneSets
allele_freq
biomaRt
getBM
1 day ago • updated 17 hours ago
Abiologist
• 0
0
votes
3
replies
106
views
STRINGdb : error with string_db$plot_network()
STRINGdb
updated 2 days ago by
damian.szk
▴ 80 • written 2 days ago by
ninidea
• 0
0
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0
replies
52
views
determine k during RUVSeq
RUVSeq
RUVnormalize
3 days ago
Ειρήνη
• 0
0
votes
0
replies
52
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ReactomeGSA for RNASeq
ReactomeGSA
BatchEffect
RNASeqData
3 days ago
Shaimaa Gamal
• 0
0
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0
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14
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Spam:
Unveiling Unmatched Best Custom Patches
SIMAT
3 days ago
oliverelijhan
0
0
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0
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71
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ChIPseeker peak_Profile_Heatmap color palette
ChIPseeker
3 days ago
Anton01
• 0
0
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0
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46
views
GAGE results interpretation with gene-foldchange as input for cases of all-negative foldchange
GO
KEGG
gage
pathview
4 days ago
danalvoronov
▴ 10
0
votes
0
replies
45
views
query regarding how to apply WGCNA on replicates
replicatesRNAseq
WGCNA
4 days ago
k200987
• 0
0
votes
0
replies
40
views
Difference in Contrast in DiffBind
DiffBind
4 days ago
zzrammal
• 0
0
votes
0
replies
57
views
QSEA- Extraction of Normalized methylation across the samples
qsea
ngsReports
correlation
5 days ago
Researcher
• 0
1
vote
2
replies
246
views
How can I create a eigencorplot of pca created from deseq2 object with PCAtools
DESeq2
eigencorplot
PCAtools
6 days ago • updated 3 days ago
BioinfGuru
▴ 30
0
votes
2
replies
104
views
Problem finding certain variables when importing a public database GSE73103
GSEABase
GenomicDistributionsData
6 days ago • updated 5 days ago
Yveto
• 0
0
votes
3
replies
183
views
ChAMP installation issue
Cha
ChAMP
6 days ago • updated 5 days ago
e1271094
• 0
18 results • Page
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Comment: all variables in design formula must be columns in colData (Deseq2) error
by
Galina
• 0
thank you!
Comment: all variables in design formula must be columns in colData (Deseq2) error
by
ATpoint
★ 4.1k
coldata_rat <- data.frame(conditions=..., batch=...)
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
robersy
• 0
Thank you all for your comments. I will follow your suggestions.
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
Ken C
• 0
Hi Michael, thanks a lot for your prompt reply! Not sure if this is appropriate or if you are the right person to ask -- is there anything…
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
Ken C
• 0
Well, if I look at genes with baseMean>50, then the relative absolute difference in log2FoldChange (say over the absolute log2FoldChange of…
Votes
biomaRt not working - lazy table error
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
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