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Showing :
Annotationhub
•
reset
1
vote
5
replies
330
views
EnsDb: bad_weak_ptr
AnnotationHub
BiocFileCache
4 weeks ago
Lluís Revilla Sancho
▴ 730
0
votes
5
replies
503
views
Cannot connect to annotationhub server
AnnotationHub
ExperimentHub
updated 4 weeks ago by
shepherl
3.9k • written 5 weeks ago by
Mishaal Irfan
• 0
0
votes
0
replies
145
views
News:
AnnotationHub and ExperimentHub Access Downtime
AnnotationHub
ExperimentHub
5 weeks ago
shepherl
3.9k
1
vote
1
reply
232
views
Documenting resources in an `ExperimentHub` package?
AnnotationHub
ExperimentHub
updated 9 weeks ago by
James W. MacDonald
66k • written 9 weeks ago by
Tim Barry
• 0
6
votes
12
replies
5.9k
views
BiocFileCache/ExperimentHub/AnnotationHub temporary ERROR
BiocFileCache
AnnotationHub
ExperimentHub
9 months ago • updated 3 months ago
shepherl
3.9k
10
votes
41
replies
6.5k
views
Ensembl plants at annotationHub?
ensembl
ensembldb
plant
arabidopsis thaliana
annotationhub
updated 9 weeks ago by
Daniele
• 0 • written 5.7 years ago by
Guido Hooiveld
★ 4.0k
0
votes
6
replies
519
views
unable to access Annotationhub latest record
DNAMethylation
AnnotationHub
EPICv2manifest
annotation
updated 3 months ago by
Tim Peters
▴ 190 • written 3 months ago by
s.malik
• 0
2
votes
1
reply
482
views
clusterProfiler, AnnotationHub, and discrepancies in GO Terms
Atlanticsalmon
clusterPro
Salmosalar
AnnotationHub
GeneOntology
updated 4 months ago by
Michael Love
42k • written 4 months ago by
Filipe
• 0
0
votes
0
replies
269
views
Annotatr Duplicate Entries
annotatr
AnnotationHub
6 months ago
hayleyw
• 0
2
votes
28
replies
4.9k
views
Problem making orgdb package for bacteria (Pseudomonas) using annotation hub and annotation forge
AnnotationHub
AnnotationForge
Pseudomonas_aeruginosa
updated 8 months ago by
James W. MacDonald
66k • written 19 months ago by
Manmohit
▴ 10
3
votes
4
replies
1.5k
views
Annotation hub and clusterProfiler errors
clusterProfiler
Annotationhub
updated 9 months ago by
Guido Hooiveld
★ 4.0k • written 9 months ago by
BS
• 0
1
vote
2
replies
716
views
AnnotationHub data for Mus musculus seems to be missing, while previously it was there
tximeta
AnnotationHub
AnnotationHubData
9 months ago
Thon
• 0
9
votes
14
replies
6.6k
views
Where can I find EnsDb.Hsapiens.v105?
Ensembl
Rstudio
ensembldb
AnnotationHub
ensdb
updated 9 days ago by
shepherl
3.9k • written 2.5 years ago by
jon.klonowski
▴ 40
3
votes
11
replies
5.4k
views
GO enrichment analysis on Solanum lycopersicum proteomics dataset (UniProt IDs)
clusterProfiler
AnnotationHub
GO
uniprot
updated 5 months ago by
Guido Hooiveld
★ 4.0k • written 3.5 years ago by
Alberto
• 0
14 results • Page
1 of 1
Recent ...
Replies
Comment: 'path' must be string
by
James W. MacDonald
66k
Yes. We already knew that from the error message, and I told you that in my previous email. The point wasn't to figure out *where* the err…
Comment: 'path' must be string
by
cpierce2
• 0
I ran the debugger and this is the line that causes the error: ``` if (any(startsWith(pkcData[["RTS_ID"]][1L], "RTS")) & any(startsWith(pr…
Comment: Generating surrogate variables across multiple variables of interest
by
Robert
• 0
Yes, we have several biomarkers, and a proteomic set, so we are characterizing each biomarker by it's proteomic association(s). The use for…
Comment: Error running tximeta
by
Guido Hooiveld
★ 4.0k
FYI (since I just finalized a run with `salmon`). For each sample (`.`) an output folder is created that contains 3 files (`cmd_info.json`…
Comment: Error running tximeta
by
Michael Love
42k
Tximeta uses the full directory. There are files that give the key information about the transcriptome. It's not a good idea to selectively…
Votes
Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
Answer: Understanding how to contrast two treatments in DESeq2
Answer: Understanding how to contrast two treatments in DESeq2
Cannot extract TxFeatures for a defined GRanges object
Limma time series spline help
Awards
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Popular Question
to
Lluís Revilla Sancho
▴ 730
Popular Question
to
maltethodberg
▴ 180
Scholar
to
Michael Love
42k
Popular Question
to
Leonardo Collado Torres
★ 1.1k
Scholar
to
Gordon Smyth
51k
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