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Differences in ENSEMBL => ENTREZID mapping coverage between org.Hs.eg.db and AnnotationHub resources
6 months ago • updated 5 months ago
sandmann.t
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Comment: DESeq2 and heatmap for multiple comparisons
by
artem.vorobyev
•
0
this I already did.
My question is how to visualize differentially expressed genes on the heatmap for all 3 groups (healty->lesion->treat…
Comment: athPkgBuilder data source :missing probesets
by
nicklesteele532
•
0
> >>>
> >>> How to handle the one probeset to multiple locus mappings? I can
> >think 3
> >>> possible solutions:
> >>> 1. pick the "best" …
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
•
0
> sum(width(gr_toexclude))
[1] 2713499861
I excluded everything which was not locus. If small rna locus is from 2000 to 4000 and next locu…
Comment: Why in Bioconductor community people rarely upvote questions?
by
Hervé Pagès
16k
BTW I fail to see how the lack of upvotes to a question would be discouraging as long as you get a good answer. OTOH I can see how failing …
Answer: DESeq2 and heatmap for multiple comparisons
by
swbarnes2
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If you want to know what genes are different between lesion and treated, compare them to each other.
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