Bioconductor ColData

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1.2k

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DESeq2 design coldata

updated 20 months ago by swbarnes2 ★ 1.4k • written 20 months ago by arfranco ▴ 130

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1.4k

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ColData pheatmap DESeq2

written 2.6 years ago by dania.khalid • 0

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2.1k

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SingleCellExperiment colData rename

updated 2.9 years ago by Basti ▴ 780 • written 2.9 years ago by achoppe ▴ 10

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959

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BiSeq Coldata

5.6 years ago akhaira • 0

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2.4k

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deseq2 levels factor colData

updated 6.9 years ago by Michael Love 43k • written 6.9 years ago by ariel ▴ 20

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50k

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deseq2 coldata

updated 7.2 years ago by swbarnes2 ★ 1.4k • written 7.2 years ago by mjrarcher ▴ 10

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4.5k

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variantannotation coldata

updated 7.3 years ago by Valerie Obenchain ★ 6.8k • written 7.3 years ago by lvclark ▴ 10

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5.0k

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deseq2 coldata NA

updated 17 months ago by Michael Love 43k • written 7.4 years ago by t.kuilman ▴ 170

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2.1k

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multiassayexperiment colData

updated 8.1 years ago by Levi Waldron ★ 1.1k • written 8.1 years ago by Lluís Revilla Sancho ▴ 760

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Comment: Incosistencies in buildSNNGraph() function by ATpoint ★ 5.0k

Just played with this a bit and I think it comes down to not having a fixed seed before running the leiden thingy. Same goes for PCA and UM…

Answer: Incosistencies in buildSNNGraph() function by Aaron Lun ★ 29k

The most obvious thing that comes to mind is the RNG seed. `cluster_leiden()` does some random number generation, somewhere deep in the **i…

Comment: Opportunity to host EuroBioC2026 Preconference workshops! by TikTsokaas33ocissalpc • 0

Thank you for sharing the EuroBioC2026 workshop opportunity. I m interested in hosting a hands on session teaching reproducible data analys…

Comment: Ensembl plants at annotationHub? by jwp48 • 0

Nope I don't mind haha! Anyway thanks so much! Thats super kind of you!

Answer: Combining two proteomics datasets with limpa by Gordon Smyth 53k

Hi Andrew, We don't have that much experience combining different datasets with limpa yet, but my feeling is that the same DPC should be u…

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Answer: Incosistencies in buildSNNGraph() function

Answer: Where do the filename come from in the LOLA datasets?

Bioconductor Maintainer Application

A: What is logFC and "B" in methylation analysis ??

limma moderated t-statistics and B-statistics

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Popular Question to Lluís Revilla Sancho ▴ 760