Bioconductor DGElist

Showing : DGElist • reset

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144

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DGEList edgeR

26 days ago prity6459 • 0

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629

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edgeR Bioconductor Dseq2 dgelist

updated 17 months ago by Gordon Smyth 50k • written 17 months ago by Fiona • 0

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3.6k

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edger DGEList org.hs.eg.db gene annotation

updated 2.6 years ago by IIart.hubII • 0 • written 6.5 years ago by svlachavas ▴ 830

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848

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factors edgeR setup DGELIst

updated 3.0 years ago by Gordon Smyth 50k • written 3.0 years ago by Alex • 0

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1.7k

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edger DGElist

updated 5.1 years ago by Gordon Smyth 50k • written 5.1 years ago by naser.sadri • 0

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1.7k

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dgelist edger RnaSeqGeneEdgeRQL

updated 5.8 years ago by Gordon Smyth 50k • written 5.8 years ago by Kevin • 0

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2.1k

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edgeR summarizedexperiment dgelist

6.1 years ago aljoscha.leusmann • 0

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930

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tree bootstrap dgelist plotmds

6.2 years ago Larry K. • 0

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2.2k

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edger dgelist NA egsea

updated 6.2 years ago by Gordon Smyth 50k • written 6.2 years ago by belmore • 0

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3.0k

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egder dgelist group rnaseq

updated 6.5 years ago by Aaron Lun ★ 28k • written 6.5 years ago by fawazfebin ▴ 60

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3.2k

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DGElist filter edgeR

updated 6.9 years ago by Gordon Smyth 50k • written 6.9 years ago by alakatos ▴ 130

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2.5k

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edger raw reads TMM normalised values DGEList differential gene expression

updated 7.8 years ago by Steve Lianoglou ★ 13k • written 7.8 years ago by benedict.ng ▴ 20

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6.7k

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edger subsetting dgelist

updated 7.8 years ago by Gordon Smyth 50k • written 7.8 years ago by mnaymik ▴ 10

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20k

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edgeR row.names DGEList

9.3 years ago ccheung • 0

14 results • Page 1 of 1

Recent ...

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Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db") by Marcel Ramos 690

`BiocManager` does not install local packages. It only installs Bioconductor, CRAN, and GitHub ones. You should install local packages w…

Comment: error running enricher from clusterprofiler by Yael • 0

It worked!!! Thanks alot, i think something in the gene_list wasnt right... Thanks agian

Comment: Create protein sequences including variants from a VCF file by Yun • 0

This cannot work for a SNV file, since `injectSNPs` need a `SNPlocs` object

Comment: Can log2cpm be used for proteomics data normalization? by Daniel • 0

Thank you for the quick reply and I apologize for it being on the wrong thread but the "post tag" function wasn't working properly.

Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db") by Patadù ▴ 10

I have arranged the code again following the other post and also the script you suggested. Now, I managed to install `org.Vdahliae.eg.db`. …

Votes

Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")

Answer: Trim/Filter out-of-bounds GRanges

Comment: How to correctly adjust for gender in edgeR

Create protein sequences including variants from a VCF file

A: DEXSeq design formula

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Popular Question to Vincent J. Carey, Jr. 6.7k