Bioconductor EpicV2

Showing : EpicV2 • reset

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1.4k

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EPICv2 EPICv2manifest

10 months ago Joshua Llano • 0

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4.6k

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EpicV2 ChAMPdata

updated 14 months ago by icecreamlover • 0 • written 15 months ago by nurkenber • 0

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3.9k

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ChAMP EPICv2

updated 15 months ago by Ricky • 0 • written 2.6 years ago by medha.suman • 0

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498

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EpicV2 DMRcate

15 months ago kitzhu • 0

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2.6k

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sesame EPICv2manifest epicv2

updated 6 months ago by MargaretJDinan • 0 • written 19 months ago by luca.s ▴ 50

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2.5k

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sesameData EPICv2 EPICv1

updated 7 months ago by Mancy • 0 • written 19 months ago by archibold.mposhi • 0

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1.2k

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limma DMRcate MethylationArray EPICV2

updated 20 months ago by Gordon Smyth 53k • written 20 months ago by Kim • 0

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2.3k

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DNAMethylation GO MethylationArray missMethyl EPICv2

22 months ago • updated 16 months ago s.malik • 0

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2.7k

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DNAMethylation EPICv2 IlluminaHumanMethylationEPICmanifest

updated 23 months ago by James W. MacDonald 68k • written 23 months ago by rae.alshammari ▴ 20

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3.7k

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ChAMP EPICv2

updated 14 months ago by icecreamlover • 0 • written 2.0 years ago by ChunkyJones • 0

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2.4k

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sesame IlluminaHumanMethylationEPICv2anno.20a1.hg38 methylationEPICv2.0 EpicV2

updated 22 months ago by aldea85 • 0 • written 2.2 years ago by Courtney ▴ 10

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3.4k

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minfiDataEPIC EpicV2

updated 2.3 years ago by Zuguang Gu ▴ 290 • written 2.4 years ago by Izabela.ams ▴ 10

12 results • Page 1 of 1

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Answer: Making a Full Rank Model for Allele-Specific Expression with DESeq2 by Michael Love 43k

You may want to look at the coefficients you are trying to estimate with ExploreModelMatrix: https://www.bioconductor.org/packages/relea…

Comment: limpa-blank normalization and Spectronaut's PTM stoichiometry by emily.wolfrum • 0

Hi Gordon, Thanks for the quick reply. The technical or process blank samples I'm referring to are part of a set of quality control sampl…

Answer: Are individual-mouse-based statistics possible in CellChat? by ATpoint ★ 5.0k

Not a Bioconductor package, I commented on the crosspost at https://www.biostars.org/p/9617271/

Answer: DESeq2 - how to shrink LFC for pairwise comparisons having multiple groups by ATpoint ★ 5.0k

apeglm is more cumbersome than ashr as with apeglm the coefficients need to be explicitely available in the resultsNames.So, you need to re…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Martin Morgan 25k

I see rstudioapi in the `sessionInfo()`. RStudio does not support forked ('multicore') processes. Does the BiocParallel example work when y…

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A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen

Comment: limpa analysis advice

Answer: When to use edgeR or limma

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