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FlowCytometry
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0
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124
views
Macsquant FCS in read.FCS & opencyto
FlowCytometry
flowWorkspace
flowCore
8 weeks ago
taylor.witte
• 0
0
votes
0
replies
290
views
News:
Online course - FLOW CYTOMETRY DATA ANALYSIS WITH R/BIOCONDUCTOR
Bioconductor
FlowCytometryData
FlowCytometry
4 months ago
info
▴ 10
0
votes
0
replies
370
views
Merging 2 staining panels
FlowCytometry
flowCore
14 months ago
michaela.gregorova13
• 0
2
votes
1
reply
916
views
How to modify a compensation matrix in an fcs file
flowCore
FlowCytometry
18 months ago
aguirre
▴ 20
0
votes
0
replies
558
views
How to fix Flow-Data autoplot heat map
FlowCytometry
flowCore
openCyto
ggcyto
18 months ago
Dennis.hinkel
• 0
1
vote
1
reply
629
views
creating a NOT gate for gating out a single quadrant in a quadrant gate openCyto
FlowCytometry
Opencyto
updated 19 months ago by
Kevin Blighe
★ 3.9k • written 19 months ago by
Noël
• 0
0
votes
0
replies
465
views
gate_quad_sequential as parent gate for downstream gating in opencyto CSV template
opencyto
FlowCytometry
19 months ago
Noël
• 0
2
votes
9
replies
1.5k
views
Error when plotting flow cytometry data
FlowCytometry
flowCore
ggcyto
updated 20 months ago by
SamGG
▴ 350 • written 20 months ago by
alex
• 0
0
votes
0
replies
564
views
Reducing/sampling number of FCS events
FlowCytometry
flowCore
2.4 years ago
markkelly1983
▴ 20
0
votes
0
replies
704
views
Job:
Bioconductor developer
FlowCytometry
flowCore
2.4 years ago
markkelly1983
▴ 20
0
votes
1
reply
1.1k
views
[flowSOM] extracting data from tree
flowcytometry
flowSOM
flowSET
flowFrame
5.1 years ago
fabrizio.benedetti.82
• 0
0
votes
6
replies
2.1k
views
spillover::flowCore problem: Error in match(unstained, sampleNames(x))
flowcore
spillover
flowcytometry
updated 6.3 years ago by
Samuel Ahuno
• 0 • written 8.2 years ago by
Daniel Prieto
• 0
0
votes
1
reply
1.1k
views
[flowCore] linearization of logarithmic data seems to be calculated wrong
flowcore
flowcytometry
updated 6.3 years ago by
Jiang, Mike
★ 1.3k • written 6.3 years ago by
max.zhao
• 0
0
votes
1
reply
1.2k
views
Installation of "flowWorkspace" on Ubuntu fails
bioconductor
R
flowcytometry
7.3 years ago
mo
• 0
0
votes
2
replies
2.0k
views
Scaling fcs files with flowCore
flowCore
flowcytometry
8.1 years ago
Jiang, Mike
★ 1.3k
0
votes
1
reply
1.9k
views
FlowWorkspace and norm2Filter
flowcytometry
opencyto
flowworkspace
flowcore
8.2 years ago
Jiang, Mike
★ 1.3k
0
votes
1
reply
1.2k
views
FlowViz package question
flowviz
flowcytometry
8.2 years ago
Jiang, Mike
★ 1.3k
0
votes
1
reply
1.4k
views
read.flowSet error Error: vector::_M_range_check
software error
read.flowset()
read.fcs
flowcore
flowcytometry
8.3 years ago
e.bestion
• 0
1
vote
2
replies
1.2k
views
openCyto - samples with low cell counts
flowcytometry
opencyto
8.3 years ago
Jiang, Mike
★ 1.3k
0
votes
1
reply
1.3k
views
samples are reordered in read.flowSet
flowcore
flowcytometry
8.8 years ago
Jiang, Mike
★ 1.3k
0
votes
2
replies
2.0k
views
xyplot can't find channel (flowViz)
flowcore
flowviz
flowcytometry
updated 8.8 years ago by
Jiang, Mike
★ 1.3k • written 8.8 years ago by
ericjkort
• 0
0
votes
0
replies
1.3k
views
Re: FlowStats help
flowclust
opencyto
flowcytometry
9.2 years ago
Jiang, Mike
★ 1.3k
1
vote
1
reply
1.5k
views
flowCore: using read.FCS with which.lines is not time efficient?
flowcore
read.FCS
flowcytometry
updated 9.4 years ago by
Jiang, Mike
★ 1.3k • written 9.5 years ago by
skiaphrene
▴ 10
4
votes
1
reply
1.7k
views
News:
New Flow Cytometry Data Analysis Framework
flowcore
flowcytometry
opencyto
new
News
9.7 years ago
Greg Finak
▴ 150
0
votes
0
replies
1.2k
views
FlowCore - reading in flowSets
FlowCytometry
PROcess
flowCore
FlowCytometry
PROcess
flowCore
11.3 years ago
Pieter Coussement
▴ 30
25 results • Page
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Answer: Numerical differences in DESeq2 output depending on different design matrix cons
by
Michael Love
42k
Yes there can be small numerical differences in the estimated quantities because of how the algorithms decide to stop iterating.
Answer: DESeq2- Mysterious interaction suppresses DEGs
by
Michael Love
42k
Removing samples from one group nevertheless changes the variance estimation (dispersion) for all comparisons. So you could have pushed one…
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
JKim
• 0
The 1st model has an interaction term, but the 2nd model doesn't have the interaction term. That makes the difference.
Comment: Ensembl plants at annotationHub?
by
Daniele
• 0
Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
swbarnes2
★ 1.4k
If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
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