Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
GRange
•
reset
0
votes
1
reply
874
views
Error in Medips MEDIPS.CpGenrich()
software error
Grange
RangedData
5.9 years ago
mawusse.agbessi
• 0
2
votes
0
replies
1.2k
views
SOLVED. finding distance to nearest neighbour (non-self) within a list in GenomicRanges
GenomicRanges
GenomicFeatures
grange
distanceToNearest
R
6.2 years ago
rmash
▴ 20
0
votes
1
reply
941
views
Multi-sample Heatmap from GRange
GRange
updated 7.1 years ago by
James W. MacDonald
68k • written 7.1 years ago by
Danny
• 0
0
votes
3
replies
3.4k
views
Selecting columns form a list of grange objects
r
granges
grange
7.3 years ago
g.k
• 0
1
vote
3
replies
1.5k
views
GRange and bam files
bioconductor
Grange
7.7 years ago
Merlin
▴ 10
0
votes
1
reply
1.3k
views
Detect Sites with Minimum Gap in GRanges Object
R
genomicranges
granges
grange
7.8 years ago
g.k
• 0
1
vote
2
replies
2.4k
views
Detecting Overlaps within Grange Object
r
grange
granges
iranges
updated 7.8 years ago by
Michael Lawrence
★ 11k • written 7.8 years ago by
g.k
• 0
3
votes
4
replies
6.4k
views
GenomicRanges: Take union of GRanges and keep metadata?
GRange
genomicranges
updated 9.4 years ago by
Martin Morgan
25k • written 9.4 years ago by
endrebak85
▴ 40
1
vote
2
replies
3.0k
views
Extract GRanges for gene data frame
GRange
updated 9.4 years ago by
Martin Morgan
25k • written 9.4 years ago by
mdeea123
▴ 10
9
votes
21
replies
14k
views
annotate GRanges with upstream or downstream nearest gene
GRange
genomicranges
genomicfeatures
updated 10.1 years ago by
Ou, Jianhong
★ 1.3k • written 10.1 years ago by
tangming2005
▴ 200
0
votes
1
reply
1.4k
views
summarizeOverlaps on partial BAM file?
GenomicFeatures
GRange
Rsamtools
updated 11.0 years ago by
Valerie Obenchain
★ 6.8k • written 11.0 years ago by
cidster12
• 0
4
votes
2
replies
1.6k
views
about INCLUSIVE INTERSECTION of GRANGES
Grange
11.1 years ago
Bogdan
▴ 670
12 results • Page
1 of 1
Recent ...
Replies
Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2
by
Gordon Smyth
53k
My apologies, I forgot that `design.group` is not included in the final matrix, because the baseline group effects are already captured by …
Answer: Bile acid analysis with limpa
by
Gordon Smyth
53k
I am not familiar with targeted HPLC-MS and I don't know what you mean by "peak areas". If it produces standard format mass spec data from …
Comment: How to convert .raw data for use in xcms
by
TikTsossa33ssalpc
• 0
It sounds like your mzML conversion has a CV term that XCMS doesn t recognize, which often happens with newer vendor formats or outdated ms…
Comment: Boolean Gate Combination for Any 2 Positive Events in flowWorkspace
by
TikTsossa33ssalpc
• 0
To calculate event numbers for boolean combinations in flow cytometry, you should use a logic gating tool or a script that processes popula…
Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2
by
chp265
• 0
Confirming my understanding after executing the code provided: this is similar to a design formula of `~0+mouse+group+group:allele`, except…
Votes
A: DESeq2: Is it possible to convert read counts to expression values via TPM and r
A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen
Comment: limpa analysis advice
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
Awards
• All
Popular Question
to
ATpoint
★ 5.0k
Popular Question
to
Martin Morgan
25k
Teacher
to
Michael Love
43k
Popular Question
to
A
• 0
Popular Question
to
Lluís Revilla Sancho
▴ 760
Locations
• All
WEHI, Melbourne, Australia,
40 minutes ago
United States,
1 hour ago
Australia,
1 hour ago
Germany,
1 hour ago
United States,
2 hours ago
Traffic: 1503 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6