Showing : GenVisR • reset
0
votes
0
replies
705
views
GenVisR - adding on genomic positions to CovGen graph
GenVisR GenCov
3.3 years ago Amy_ • 0
3
votes
10
replies
4.3k
views
error in package GenVisR while installing
GenVisR GenVis
updated 2.2 years ago by ▴ 30 • written 3.5 years ago by • 0
0
votes
1
reply
1.8k
views
Unable to install GenVisR under most recent R / Bioconductor version; waterfall option mainDropMut is not working
Install mainDropMut GenVisR
updated 3.6 years ago by 16k • written 3.6 years ago by • 0
0
votes
0
replies
2.9k
views
How to generate a waterfall plot of mutations and CNAs that don't overlap
GenVisR maftools
3.6 years ago e • 0
0
votes
1
reply
1.7k
views
Waterfall failing with custom file: Error in `colnames<-`(`*tmp*`, value = c("sample", "gene", "trv_type")) : attempt to set 'colnames' on an obje…
variants waterfall GenVisR
updated 5.2 years ago by ▴ 30 • written 5.2 years ago by ▴ 10
0
votes
1
reply
1.1k
views
Adding layer to legend in waterfall plot
GenVisR ggplot2 waterfall
6.2 years ago sheneicechang • 0
0
votes
0
replies
1.3k
views
Output GenVisR mutation frequency data by gene name instead of by sample name
GenVisR mutation frequency R cancer bioconductor
6.3 years ago sheneicechang • 0
0
votes
1
reply
1.6k
views
how to save picture and add title to waterfall GenVisR mutation analyse?
GenVisr genvisr waterfall mutation
updated 7.1 years ago by ▴ 30 • written 7.2 years ago by • 0
0
votes
1
reply
1.2k
views
Issues with lohSpec
genvisr lohSpec
7.5 years ago dharia.priyadarshani • 0
0
votes
2
replies
1.8k
views
Copy Number plot cnSpec - how to order samples
genvisr
7.6 years ago cedric.vmdl • 0
0
votes
4
replies
2.9k
views
GenVisR- cnSpec CNV plot
GenVisR
8.0 years ago daijieqiong ▴ 10
0
votes
2
replies
1.7k
views
an error in TvTi: package GenVisR
GenVisR
updated 8.9 years ago by ▴ 30 • written 8.9 years ago by ▴ 670
2
votes
5
replies
3.4k
views
GenVisR Installation error message
genvisR
9.9 years ago Deep Adhya ▴ 20
13 results • Page 1 of 1
Recent ...
Replies
Answer: limpa-blank normalization and Spectronaut's PTM stoichiometry by Gordon Smyth 53k
limpa reads standard feature-level output from Spectronaut. You do not need to make any changes to the output before reading it into limpa.…
Comment: Question about the filterByExpr function inputs in edgeR by mohammedtoufiq91 ▴ 10
@gordonsmyth Noted, thank you very much.
Comment: Question about the filterByExpr function inputs in edgeR by Gordon Smyth 53k
Regarding edgeR v4 filtering, I didn't mention anything about a minimum count of 10 but rather said "a positive count". So a minimalistic f…
Comment: limpa-blank normalization and Spectronaut's PTM stoichiometry by JKim • 0
Hi Emily, He left some comments regarding normalization. Here is the relevant quote: > The EList object produced by dpcQuant(), containi…
Comment: Joining different datasets and analyzing using the group-specific condition effe by James W. MacDonald 68k
Yes, making a group factor simplifies things, and you will need a new column for disease subject to avoid having a design that is not full …
Votes
Comment: Question about the filterByExpr function inputs in edgeR
Answer: Question about the filterByExpr function inputs in edgeR
Answer: Question about the filterByExpr function inputs in edgeR
A: DESeq2: What is the unit of DESeq2 normalized read count (VST)? Is it tag per mi
Answer: Clarification on counting in Rsubread (featureCounts)
Awards • All
Autobiographer to Frances Turner ▴ 20
Popular Question to maltethodberg ▴ 180
Popular Question to mohammedtoufiq91 ▴ 10
Popular Question to Lluís Revilla Sancho ▴ 760
Commentator to James W. MacDonald 68k
Locations • All
Melbourne, Australia, 21 minutes ago
WEHI, Melbourne, Australia, 1 hour ago
Singapore, 1 hour ago
The Netherlands, 2 hours ago
United States, 2 hours ago
Traffic: 1142 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6