Showing : GenVisR • reset
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GenVisR - adding on genomic positions to CovGen graph
GenVisR GenCov
3.1 years ago Amy_ • 0
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error in package GenVisR while installing
GenVisR GenVis
updated 24 months ago by ▴ 30 • written 3.3 years ago by • 0
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Unable to install GenVisR under most recent R / Bioconductor version; waterfall option mainDropMut is not working
Install mainDropMut GenVisR
updated 3.4 years ago by 16k • written 3.4 years ago by • 0
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How to generate a waterfall plot of mutations and CNAs that don't overlap
GenVisR maftools
3.4 years ago e • 0
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1.6k
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Waterfall failing with custom file: Error in `colnames<-`(`*tmp*`, value = c("sample", "gene", "trv_type")) : attempt to set 'colnames' on an obje…
variants waterfall GenVisR
updated 5.0 years ago by ▴ 30 • written 5.0 years ago by ▴ 10
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1.1k
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Adding layer to legend in waterfall plot
GenVisR ggplot2 waterfall
6.0 years ago sheneicechang • 0
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Output GenVisR mutation frequency data by gene name instead of by sample name
GenVisR mutation frequency R cancer bioconductor
6.1 years ago sheneicechang • 0
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1.5k
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how to save picture and add title to waterfall GenVisR mutation analyse?
GenVisr genvisr waterfall mutation
updated 6.9 years ago by ▴ 30 • written 7.0 years ago by • 0
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1.2k
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Issues with lohSpec
genvisr lohSpec
7.3 years ago dharia.priyadarshani • 0
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1.7k
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Copy Number plot cnSpec - how to order samples
genvisr
7.4 years ago cedric.vmdl • 0
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2.8k
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GenVisR- cnSpec CNV plot
GenVisR
7.8 years ago daijieqiong ▴ 10
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1.6k
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an error in TvTi: package GenVisR
GenVisR
updated 8.7 years ago by ▴ 30 • written 8.7 years ago by ▴ 670
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5
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GenVisR Installation error message
genvisR
9.7 years ago Deep Adhya ▴ 20
13 results • Page 1 of 1
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Answer: Integration: Paired-end vs healthy single-end from a different source by James W. MacDonald 68k
If by reprocess you mean generate libraries and re-sequence, then that's something you could do. Otherwise the biological and technical dif…
Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k
I can reproduce this and have opened an issue on the code base https://github.com/Bioconductor/support.bioconductor.org/issues/112
Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k
we can investigate this issue. thank you for bringing it to our attention
Comment: deseq2 filter the low counts by Michael Love 43k
> But within each comparison (contrast), if I trace some DEGs back to the original salmon merged gene counts (or even to normalised counts)…
Comment: deseq2 filter the low counts by empty_mt • 0
Thank you for you suggestion to look at the pre-filtering section in the DESeq2 vignettes - am I missing something? I have 6 treatments, …
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Bioconductor 3.22 Released!
Bioconductor 3.22 Released!
Comment: "Watched Tags" are being erased rather than updated
Comment: deseq2 filter the low counts
Answer: DESeq2 interactions
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