Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
HELP
•
reset
0
votes
7
replies
1.8k
views
DESeq2 with interest only for 1 gene
R
deseq2
differential gene expression
help
7.9 years ago • updated 7.8 years ago
fischer87
• 0
4
votes
5
replies
2.5k
views
edgeR- DE analysis with no replicates
edger
differential gene expression
without replicate
nested design
help
updated 7.8 years ago by
Aaron Lun
★ 28k • written 7.8 years ago by
knipehf
• 0
1
vote
4
replies
5.9k
views
ClusterProfiler - How to : input file, groupGo, enrichGo
clusterprofiler
input files
error
help
updated 7.1 years ago by
Guangchuang Yu
★ 1.2k • written 7.1 years ago by
Mataivic
• 0
0
votes
2
replies
1.0k
views
Design matrix choice for time series experiment using limma
limma
time series
help
updated 5.3 years ago by
Aaron Lun
★ 28k • written 5.3 years ago by
rm1238
• 0
0
votes
2
replies
1.3k
views
help me to analysis my data
limma
help
updated 8.4 years ago by
svlachavas
▴ 830 • written 8.4 years ago by
libya.tahani
• 0
1
vote
9
replies
4.2k
views
DESeq problems
help
DESeq2
DESeqDataSetFromMatrix
rownames
updated 22 months ago by
Sanatan
• 0 • written 3.0 years ago by
dorina.jamniczky
• 0
0
votes
1
reply
566
views
Data visualization
HELP
Data
updated 20 months ago by
Guido Hooiveld
★ 3.9k • written 20 months ago by
mcclurejenniferc
• 0
0
votes
10
replies
1.5k
views
Peak annotation
HELP
ChIC.data
PeakDetection
ChipOnChipData
18 months ago
michela
▴ 20
3
votes
4
replies
1.3k
views
GEO + RNA-seq. Total Newbie.
RNASeqData
RNASeq
GEO
RNASeqR
HELP
3.1 years ago
hgalmoore
• 0
2
votes
4
replies
1.7k
views
STRINGdb string_db$map error
STRINGdb
HELP
updated 14 months ago by
Rodrigo
▴ 10 • written 2.2 years ago by
Jessica
▴ 10
3
votes
4
replies
1.2k
views
why makeGRangesFromDataFrame don't do the IRange
HELP
HelloRanges
updated 18 months ago by
James W. MacDonald
65k • written 18 months ago by
michela
▴ 20
1
vote
2
replies
2.4k
views
ChIPpeakAnno findOverlapsOfPeaks error: "Error in FUN(X[[i]], ...) : Inputs contains duplicated ranges. please recheck your inputs."
HELP
ChIPpeakAnno
2.5 years ago
lexi.kellington
• 0
2
votes
6
replies
1.4k
views
Help me find the bug
DESeq2
HELP
14 months ago
Michael
• 0
0
votes
4
replies
1.2k
views
Volcano plot becomes flipped when I add a third condition
DESeq2
volcanoplot
deseq
HELP
contrast
updated 14 months ago by
Basti
▴ 780 • written 14 months ago by
Michael
• 0
0
votes
1
reply
2.0k
views
setup microbiome error
help
software error
updated 5.3 years ago by
Martin Morgan
25k • written 5.3 years ago by
mafusa20
• 0
0
votes
1
reply
322
views
Gene expression analysis and network construction for bachelor thesis
bachelorthesis
help
HELP
updated 8 months ago by
DrFizz
• 0 • written 8 months ago by
melander
• 0
0
votes
2
replies
712
views
Empty matrix
ChIPpeakAnno
Normalization
EnrichedHeatmap
HELP
TxDb.Celegans.UCSC.ce11.refGene
18 months ago
michela
▴ 20
17 results • Page
1 of 1
Recent ...
Replies
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh LOL. My markdown got edited by the markdown editor! What is between the p and 50 in the first case is the HTML for greater than or equal…
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Ah, good point. You could instead try ``` > library(ggtext) > keyvals.shape = c(rep(3,10), rep(2,8)) > names(keyvals.shape) = ifelse(keyva…
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
pl23
• 0
Hi, Yes, I've tried this, but I am not sure if it is possible to assign `bquote` values to the names of a vector. In particular, if I use…
Votes
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
Awards
• All
Scholar
to
James W. MacDonald
65k
Supporter
to
JKim
• 0
Popular Question
to
Gordon Smyth
50k
Popular Question
to
Chris
• 0
Supporter
to
Jonathan
▴ 10
Locations
• All
Melbourne, Australia,
11 minutes ago
France,
16 minutes ago
WEHI, Melbourne, Australia,
2 hours ago
United States,
3 hours ago
UPF, Barcelona, Spain,
3 hours ago
Traffic: 696 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6