Bioconductor HiTC

Showing : HiTC • reset

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1.2k

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HiTC importC sparseMatrix

2.9 years ago • updated 2.8 years ago shikha • 0

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1.3k

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HiTC HiC-Pro

5.1 years ago sergio.espeso-gil • 0

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1.8k

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HiTC

updated 3.8 years ago by ahmed.abbaselmahdi • 0 • written 5.8 years ago by Konstantin Okonechnikov ▴ 40

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2.1k

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Hi-C HiTC

6.7 years ago ta_awwad ▴ 10

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1.5k

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HiTC

6.8 years ago cath ▴ 30

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2.0k

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HiTC IRanges windows debian

updated 7.1 years ago by Nicolas Servant ▴ 260 • written 7.1 years ago by René Wiegandt • 0

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1.7k

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HiTC

updated 8.0 years ago by Nicolas Servant ▴ 260 • written 8.0 years ago by enrique.vidal ▴ 10

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2.6k

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hi-c HiTC fourcseq

9.5 years ago • updated 9.3 years ago Nicolas Servant ▴ 260

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1.4k

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hic-c hitc fourcseq

9.5 years ago Nicolas Servant ▴ 260

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3.2k

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HiTC gothic diffhic HiC

9.6 years ago Bogdan ▴ 670

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1.0k

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HiTC

9.6 years ago Bogdan ▴ 670

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1.2k

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importing HiTC

10.0 years ago gugpuccio ▴ 10

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2.8k

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BSgenome hexbin BSgenome IRanges genomeIntervals GenomicRanges girafe Rsamtools HiTC HiTC

updated 12.1 years ago by Dan Tenenbaum ★ 8.2k • written 12.1 years ago by Wim Kreinen ▴ 100

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1.6k

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Annotation HiTC Annotation HiTC

updated 12.2 years ago by Valerie Obenchain ★ 6.8k • written 12.2 years ago by Hermann Norpois ▴ 170

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1.4k

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HiTC HiTC

updated 12.2 years ago by Martin Morgan 25k • written 12.2 years ago by Hermann Norpois ▴ 170

15 results • Page 1 of 1

Recent ...

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Answer: how to use `arrayWeightsQuick()`? by Gordon Smyth 52k

Yes, that is the correct way to use `arrayWeightsQuick`. Thanks for pointing out that there is still a reference to `arrayWeightsSimple` i…

Answer: fast apply on RleList by story.benjamin ▴ 20

solved with viewApply (code is simplified below) + map reduce on chrs test.split <- split(test.gr,seqnames(test.gr)) final.st…

Comment: fast apply on RleList by story.benjamin ▴ 20

Hi James, thanks for the reply. I ultimately figured it out ... viewApply showed a massive speed increase for me (see other answer) - I was…

Answer: fast apply on RleList by James W. MacDonald 68k

There is already a 'mean' function that will dispatch on an `RleList` that you can use. I don't have a long `RleList` in hand to test it on…

Answer: Custom CDF creation for HTA 2.0 array using GTF annotation by James W. MacDonald 68k

It doesn't appear that Manhong Dai is working at UM any longer, and the webpage appears to have fallen into disrepair (for example, the lin…

Votes

annotation EpicV2

Answer: fast apply on RleList

Answer: BiocParallel_1.40.1.tar.gz not available

Modelling gene program dynamics across time with {lemur}

A: DESeq2 one group vs multiple groups comparison in presence of batch effect

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Popular Question to Ariel Chernomoretz ▴ 170