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Postdoctoral associate in Computational Biology for the Lung PreCancer Atlas in the HTAN (Boston University)
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4.3 years ago
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[apply by 8/15] PhD scholarship on functional and evolutionary genomics
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Australia
4.7 years ago • updated 4.5 years ago
Gordon Smyth
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Bioinformatician, Stem Cell Translation Laboratory, National Center for Advancing Translational Sciences (NCATS), NIH
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António Miguel de Jesus Domingues
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Robert Ivanek
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Post-doc position in multi-omics of Alzheimer's disease at Columbia University in New York City
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postdoc
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4.9 years ago • updated 4.8 years ago
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Computational biology of cancer (Postdoc Position)
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Basel
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4.9 years ago
Robert Ivanek
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Steve Lianoglou
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5.0 years ago
Laura
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Data Scientist Proteomics (100%), Biozentrum, University of Basel, Switzerland
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5.1 years ago
Robert Ivanek
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66 results • Page
2 of 2
Recent ...
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Comment: DECIPHER DesignProbes unable to design FISH-probes
by
Erik Wright
▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment
by
Michael Love
43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment
by
Michael Love
43k
The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
Answer: PTM analysis in LIMPA
by
Gordon Smyth
53k
For PTM analysis, the usual quantification command dpcQuant() is replaced by dpcImpute(). Otherwise the limpa pipeline is the same as for a…
Answer: problem reading bam files into nucleR
by
James W. MacDonald
68k
The first step is to update to the current versions of R/Bioconductor and try again. It's possible that you have run into a bug that's alre…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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