Bioconductor MEDIP-seq

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685

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R medip-seq MEDIPS

21 months ago Luomeng • 0

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1.9k

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MEDIP-seq CNV TCGA450KHumanMethylationCalibrationDataset qsea PRAD

3.5 years ago • updated 3.4 years ago rtrivedi1 ▴ 10

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1.5k

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MEDIPS MeDIP-seq

updated 3.1 years ago by Lukas ▴ 20 • written 5.0 years ago by lshepard ▴ 40

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869

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medip-seq createset

updated 5.8 years ago by Bioconductor Community 0 • written 5.9 years ago by oussama.badad • 0

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1.1k

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medips medip-seq dna methylation dmr analysis

updated 5.9 years ago by Lukas Chavez ▴ 570 • written 5.9 years ago by mtefit • 0

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940

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medip-seq methylation CpGs

6.0 years ago saripalligautam86 ▴ 10

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2.2k

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medips bsgenome medip-seq

updated 6.6 years ago by Lukas Chavez ▴ 570 • written 6.6 years ago by vjain • 0

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7.5k

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diffbind medip-seq edger deseq2

updated 9 weeks ago by khanwaled68 • 0 • written 8.6 years ago by florian.noack ▴ 60

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2.1k

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R medips medip-seq

8.2 years ago • updated 7.4 years ago stb • 0

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1.9k

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medips medip-seq error lukas

updated 7.5 years ago by Matthias Lienhard ▴ 280 • written 7.5 years ago by anupriyaverma1408 • 0

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1.4k

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medips medip-seq peak finding luckas

updated 7.5 years ago by Lukas Chavez ▴ 570 • written 7.5 years ago by anupriyaverma1408 • 0

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1.3k

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medips R medip-seq pair-end reads

updated 7.9 years ago by Lukas Chavez ▴ 570 • written 7.9 years ago by stb • 0

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1.2k

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medips medip-seq R pair-end reads

updated 8.1 years ago by Lukas Chavez ▴ 570 • written 8.1 years ago by stb • 0

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1.7k

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R medip-seq medips bwa

updated 8.3 years ago by Lukas Chavez ▴ 570 • written 8.3 years ago by stb • 0

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1.5k

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annotation chippeakanno rattus norvegicus medip-seq

8.7 years ago Vang Le ▴ 80

15 results • Page 1 of 1

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Comment: Problem at champ.load by icecreamlover • 0

Hello! Were you able to figure this out? I am running into the same error!

Comment: ChAMP - obtaining beta values using EPICv2 annotation by icecreamlover • 0

Hello, Were you able to fix the error? I used the same document and I am running into the same error. I am curious if you have any feedba…

Comment: BiomaRt Possible Ensembl SSL connectivity problems detected. by Adam • 0

Can this please be revisited and corrected ASAP? I'm encountering the same issue, using a slightly more modern version of R (4.1.0). It s…

Comment: Combining RNAseq and microarray data using edgeR/limma-voom by Adam Marstrand • 0

Thank you!

Comment: Combining RNAseq and microarray data using edgeR/limma-voom by Adam Marstrand • 0

Hi Gordon, Thanks for the answer! This makes a lot of sense. Your suggested pipeline (separate processing of datasets -> gene set analyses…

Votes

A: Up/Down Regulated GeneList from edgeR and R

A: Down/Up-regulated genes asymmetry in edgeR differential expression analysis

Answer: Combining RNAseq and microarray data using edgeR/limma-voom

Answer: How do I merge a list of GRanges?

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