Showing : PROcess • reset
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Announcement: Deadline for new package submission
PROcess PROcess
16.4 years ago Nishant Gopalakrishnan ▴ 340
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GO.db and Gostats question
Annotation GO PROcess GOstats Annotation GO PROcess GOstats
updated 16.4 years ago by ★ 7.2k • written 16.4 years ago by ▴ 570
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read coverage per transcript for RNASeq
RNASeq Coverage PROcess ShortRead RNASeq Coverage PROcess ShortRead
updated 16.4 years ago by 25k • written 16.4 years ago by ▴ 40
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question about ontoCompare() performance change
GO PROcess goTools GO PROcess goTools
16.5 years ago Oana VIGY ▴ 80
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Filtering genes in illumina datasets obtained with GEOquery
PROcess PROcess
updated 16.5 years ago by 21k • written 16.5 years ago by ▴ 80
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biomaRt does not like flies
PROcess biomaRt PROcess biomaRt
16.6 years ago Wolfgang Huber ★ 13k
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build.mappings() from Agi4x44PreProcess is not helping me today
GO GUI hgug4112a limma PROcess Agi4x44PreProcess GO GUI hgug4112a limma PROcess
16.6 years ago Massimo Pinto ▴ 390
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To bioinformatics and maanova expert
PROcess maanova PROcess maanova
16.6 years ago Loren Engrav ★ 1.0k
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2 color Nimblegen data and limma
limma PROcess limma PROcess
updated 16.6 years ago by ★ 4.3k • written 16.6 years ago by ▴ 750
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rtracklayer <-> UCSC interaction currently broken
PROcess rtracklayer PROcess rtracklayer
16.6 years ago Michael Lawrence ▴ 620
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biomaRt does not like flies
PROcess biomaRt PROcess biomaRt
16.6 years ago Simon Anders ▴ 150
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ANNOUNCEMENT: 20% discount on the most recent bioconductor/R books from Chapman & Hall/CRC!
Cancer PROcess Cancer PROcess
16.6 years ago Calver, Rob ▴ 10
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You have 1 unread message
PROcess PROcess
16.6 years ago HSBC Online Banking ▴ 10
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2.0k
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Affy Gene ST arrays with "oligo"
BiocViews Annotation Organism affy PROcess biocViews BiocViews BiocViews Annotation affy
updated 16.7 years ago by ★ 3.9k • written 16.7 years ago by ▴ 830
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Congratulations!
PROcess PROcess
16.7 years ago Commonwealth Bank of Australia ▴ 40
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Simple beadarraySNP analysis
SNP Normalization Cancer Colon PROcess beadarraySNP copynumber SNP Normalization Cancer
16.7 years ago Dmitri Mouradov ▴ 20
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2.6k
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quantile robust and RMA in xps
Normalization PROcess xps Normalization PROcess xps
updated 16.7 years ago by ★ 3.9k • written 16.7 years ago by ▴ 510
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Upgrading R
PROcess PROcess
updated 16.7 years ago by ▴ 320 • written 16.8 years ago by ▴ 70
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[Bioc] Is Nimblegen Training worth it?
PROcess PROcess
16.8 years ago Thomas Hampton ▴ 750
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Question regarding Affy SNP 5.0/BI_SNP arrays
SNP Annotation cdf affy PROcess oligo SNP Annotation cdf affy PROcess oligo
updated 16.8 years ago by ▴ 40 • written 16.8 years ago by ▴ 120
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MEDME for MeDIP on Affymetrix promoter arrays
PROcess MEDME PROcess MEDME
updated 16.8 years ago by ▴ 200 • written 16.9 years ago by ▴ 330
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RMA implemented in oligo package vs affy package
ExperimentData cdf affy PROcess oligo ExperimentData cdf affy PROcess oligo
16.9 years ago heyi xiao ▴ 360
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justGCRMA problem :(
GO Cancer gcrma matchprobes PROcess affyio GO Cancer gcrma matchprobes PROcess affyio
updated 16.9 years ago by ▴ 20 • written 16.9 years ago by 25k
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helps about exporting with limma
limma PROcess limma PROcess
updated 16.9 years ago by 21k • written 16.9 years ago by ▴ 10
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4
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1.5k
views
Possible bug in ShortRead pileup function
PROcess PROcess
updated 16.9 years ago by 25k • written 16.9 years ago by ▴ 100
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Problems reading multiple MAQ map files with ShortRead ReadAligned
Cancer PROcess ShortRead charm Cancer PROcess ShortRead charm
16.9 years ago Martin Morgan 25k
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Curious file size issues
Annotation Cancer PROcess Annotation Cancer PROcess
updated 16.9 years ago by 6.7k • written 16.9 years ago by ★ 1.9k
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Announcement: Deadline for new package submission
PROcess PROcess
16.9 years ago Nishant Gopalakrishnan ▴ 340
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RmiR, request for new package
miRNA Annotation GO cdf probe PROcess Category miRNA Annotation GO cdf probe PROcess
16.9 years ago Nishant Gopalakrishnan ▴ 340
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justGCRMA problem :(
GO gcrma matchprobes PROcess affyio GO gcrma matchprobes PROcess affyio
16.9 years ago Jacek Nowak ▴ 20
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qPCR NEWS - February 2009
qPCR Normalization PROcess microRNA qPCR Normalization PROcess microRNA
17.0 years ago qPCR Platform - the reference in real-t… ▴ 170
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Are you Lost on the Marketing Concept -
PROcess PROcess
17.0 years ago Leslie Jolliff ▴ 10
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1.5k
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Repost of Error Message: Error in dim(data)<-dim: attempt to set an atrribute on NULL
Cancer PROcess Cancer PROcess
updated 17.0 years ago by 68k • written 17.0 years ago by 25k
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getSeq human genomic sequences
Annotation Cancer BSgenome PROcess GLAD BSgenome IRanges Annotation Cancer BSgenome GLAD
17.0 years ago Hervé Pagès 16k
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Newbie Illumina Probe Annotation (beadarray) Problem
Annotation probe PROcess beadarray Annotation probe PROcess beadarray
updated 17.0 years ago by ▴ 40 • written 17.0 years ago by ▴ 10
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Select an affybatch subset prior to normalization
Normalization cdf PROcess Normalization cdf PROcess
updated 17.0 years ago by ★ 2.0k • written 17.0 years ago by ▴ 840
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Problems with EBImage installation
PROcess EBImage PROcess EBImage
updated 17.0 years ago by ▴ 30 • written 17.0 years ago by ▴ 30
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Talk & Poster - Final Call - qPCR 2009 Event
SNP qPCR Normalization Visualization Regression Cancer probe PROcess microRNA SNP qPCR
17.2 years ago • updated 17.1 years ago qPCR Platform - the reference in real-t… ▴ 170
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Bioc-devel Digest, Vol 57, Issue 4
Annotation Normalization GO affy PROcess Annotation Normalization GO affy PROcess
17.1 years ago rcaloger ▴ 500
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1.1k
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biomaRt difference from biomart.org?
PROcess biomaRt PROcess biomaRt
updated 17.1 years ago by ▴ 660 • written 17.1 years ago by ▴ 30
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qPCR NEWS - December 2008
qPCR graph PROcess microRNA qPCR graph PROcess microRNA
17.1 years ago qPCR Platform - the reference in real-t… ▴ 170
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issue with lmFit in limma
limma PROcess limma PROcess
updated 17.2 years ago by 68k • written 17.2 years ago by ▴ 60
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Affymetrix Array Rat Gene 1.0 ST - some annotation challenges
Annotation Normalization probe affy PROcess oligo exonmap Annotation Normalization probe
17.2 years ago Alexander C Cambon ▴ 30
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Custom CDF files
Annotation GO cdf affy PROcess oligo pdInfoBuilder Annotation GO cdf affy PROcess
updated 17.2 years ago by ★ 1.1k • written 17.2 years ago by ▴ 20
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Loading problem with Rlibstree and microRNA packages on MacOS X 10.4
GUI Cancer Breast hgu133plus2 PROcess rtracklayer microRNA GUI Cancer Breast hgu133plus2
17.2 years ago Steven McKinney ▴ 310
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882
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Custom CDF files
Annotation GO cdf affy PROcess Annotation GO cdf affy PROcess
17.2 years ago Edward Oakeley ▴ 20
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Talk & Poster Call - qPCR 2009 Event
SNP qPCR Normalization Visualization Regression Cancer probe PROcess microRNA SNP qPCR
17.2 years ago qPCR Platform - the reference in real-t… ▴ 170
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1
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1.2k
views
Oligo:read.xysfiles fails
PROcess oligo PROcess oligo
17.2 years ago Mikko Arvas ▴ 90
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2
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1.4k
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Does old workspace work?
Regression probe gcrma PROcess maanova Regression probe gcrma PROcess maanova
updated 17.2 years ago by ★ 6.5k • written 17.2 years ago by ★ 1.0k
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adding KEGG annotations with ABPkBuilder from E.coli
Annotation annotate AnnBuilder PROcess Category Annotation annotate AnnBuilder PROcess
17.3 years ago Marc Carlson ★ 7.2k
651 results • Page 8 of 14
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Answer: Limma-voom sample weights and impact on DEG numbers by fawadsaafir • 0
<a href="https://deltaexecutoor.com/">delta apk</a> también conocido como Delta X, es una herramienta avanzada para ejecutar scripts perso…
Comment: Error message that there is no package called Biobase by DamionLedner99 • 0
thanks for sharing!!! https://cran.r-project.org/
Comment: msmsTests, inconsistent sign between lFC.Av and LogFC by Ben • 0
Continued here due to posting difficulties: Extract from the results table: ``` Inhibitor Vehicle lFC.Av LogFC ... F1 0.0 27…
Answer: DESeq2 for 16S rRNA Analysis by James W. MacDonald 68k
The Wald test is only meant for comparison of two groups at a time, so it depends on what you mean by 'analyze across multiple groups at a …
Comment: MetaDE.pvalue: Error in xj[i]: invalid subscript type 'list' by varying.mastodon.isyn • 0
Oh, that error! I remember wrestling with that one for hours when I was first learning Python. Turns out I was trying to use a list itself …
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Answer: What happens to genes with low dispersion during dispersion shrinkage in DESeq2
Comment: Are transformed values from rlog /vst log2 normalized counts?
Answer: Are transformed values from rlog /vst log2 normalized counts?
A: DESeq2 normalization vs VST vs rlog
Answer: How to directly decet the outlier samples (libraries) in EdgeR pipeline
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