Bioconductor RNA-seq

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193

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rna-seq duplicateCorrelation limma voom

4 days ago • updated 3 days ago Dylan.Sheerin • 0

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223

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RNA-seq DESeq2

updated 8 days ago by ATpoint ★ 4.1k • written 10 days ago by Reza • 0

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358

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rna-seq edgeR

updated 22 days ago by Gordon Smyth 50k • written 5 weeks ago by Netanel • 0

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915

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correlation pearsoncorrelation rna-seq differential gene expression

updated 5 months ago by ATpoint ★ 4.1k • written 6.1 years ago by saad_k6 • 0

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317

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RNA-Seq WGCNA Worms

5 months ago davca • 0

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723

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RNA-seq DESeq2

7 months ago ar14g12 • 0

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3.5k

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RNA-seq featureCounts ht-seq

written 3.8 years ago by ag1805x ▴ 80

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1.7k

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GeneExpression GenomicFeatures RNA-Seq TPM

updated 7 months ago by Gordon Smyth 50k • written 8 months ago by gingergeiger22 • 0

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668

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DEXSeq RNA-seq DESeq2

updated 8 months ago by Alejandro Reyes ★ 1.9k • written 8 months ago by Alice • 0

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885

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BatchEffect lfcshrink RNA-seq DESeq2

9 months ago Eva ▴ 10

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702

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rna-seq salmon fishpond swish

updated 11 months ago by Michael Love 42k • written 11 months ago by samuelcjx • 0

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1.2k

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filtering RNA-Seq CPM edgeR filterByExpr

updated 11 months ago by Gordon Smyth 50k • written 11 months ago by mohammedtoufiq91 ▴ 10

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2.3k

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Spike-in RNASeqR DESeq2 Normalization rna-seq

updated 8 months ago by manuel.fernandez • 0 • written 2.1 years ago by cicely.day • 0

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isoformswitchanalyzeR rna-seq splice-variants

written 5.1 years ago by saddamhusain77 • 0

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7.8k

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deseq2 edgeR rna-seq

updated 25 days ago by Elizabeth • 0 • written 8.8 years ago by gthm ▴ 30

15 results • Page 1 of 1

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Comment: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa by alex.pico ▴ 20

Hi Matthew. Happy to help. The error message you are getting is indeed not very helpful. It's just saying that the CyREST return obj "res" …

Comment: ChipQC 'names' attribute [9] must be the same length as the vector [2]' by bandconductor • 0

thanks! you have saved me so much time

Comment: Problem finding certain variables when importing a public database GSE73103 by Guido Hooiveld ★ 3.9k

FWIW: when I would like to make use of publicly available data, I always use the website to explore which metadata is submitted to GEO (and…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

This is `blockLength=200000`, and providing `seg=seg`? It's alright that it's not identical. In the bootstrapped data, you will now have l…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0

Thank you, Michael. I used the script shared by you. The genomic distribution of the original and null loci looks like non-stationary. Plea…

Votes

Answer: ChipQC 'names' attribute [9] must be the same length as the vector [2]'

ChipQC 'names' attribute [9] must be the same length as the vector [2]'

A: DEXSeq time course design

using variable in design formula

differential expression for Single-cell RNAseq data using edgeR

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