Bioconductor RNASeqRData

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1.1k

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Deseq2 RNASeqRData unbalancedsamplesize

updated 24 months ago by Michael Love 42k • written 3.3 years ago by Cihat • 0

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2.7k

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RNASeqRData GO

3.2 years ago Wuschel ▴ 10

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2.1k

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RiboProfiling DESeq2 Bioconductor RNASeqRData

updated 18 months ago by Kevin Blighe ★ 3.9k • written 3.3 years ago by Taufiq • 0

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689

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find RNASeqRData

updated 18 months ago by ATpoint ★ 4.1k • written 18 months ago by yuhang • 0

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1.4k

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RNASeqRData TPM

updated 19 months ago by ATpoint ★ 4.1k • written 19 months ago by prashali.bansal ▴ 10

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828

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microRNA gene RNASeqRData edgeR geneontology

18 months ago faiza • 0

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792

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RNASeqRData edgeR RNASeqR RNASeqData

updated 2.2 years ago by Gordon Smyth 50k • written 2.2 years ago by vikycairoli • 0

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895

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RNASeqRData combat_Seq BatchEffect

2.6 years ago • updated 2.3 years ago zeegzaag • 0

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750

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RNAinteract rnaseqGene RNASeqRData rnaseqcomp

3.3 years ago Bogdan ▴ 670

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875

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RNASeqRData limma RNASeq RNASeqR

updated 3.1 years ago by Gordon Smyth 50k • written 3.1 years ago by Rita • 0

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3.2k

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RNASeqRData

updated 2.2 years ago by Michael Love 42k • written 2.2 years ago by beslinail • 0

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476

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RNASeq RNASeqData RNASeqRData

20 months ago marymshahi2021 • 0

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604

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RNAseqRData DeSeq2

updated 2.1 years ago by Michael Love 42k • written 2.1 years ago by Hannah • 0

13 results • Page 1 of 1

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Comment: Ensembl plants at annotationHub? by Daniele • 0

Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools by BioinfGuru ▴ 30

Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…

Answer: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by makala • 0

Thanks a lot!

Comment: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by Erik Wright ▴ 150

Thanks for notifying us of this broken link. It should be fixed on the Downloads page now. [1] [1]: http://www2.decipher.codes/Classificat…

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa by Matthew Thornton ▴ 360

So it turns out that if the count and the size are the same in 'GOstats", the odds ratio is 'inf'. These are causing the issue. Thank you!!

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Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?

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