Bioconductor RUVNormalize

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RUVSeq RUVnormalize

14 months ago Erdi ▴ 10

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466

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RUVSeq RUVnormalize

15 months ago Ειρήνη • 0

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1.4k

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DESeq2 NanoStringNCTools RUVnormalize RUVSeq DifferentialExpression

2.4 years ago AZ ▴ 30

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3.4k

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RUVnormalize R edgeR RUVSeq RUVnormalizeData

3.2 years ago Mohamed ▴ 30

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828

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RUVnormalize protein mi

6.9 years ago losik • 0

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1.4k

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RUVnormalize limma corrected expression matrix microarray

updated 7.6 years ago by Dario Strbenac ★ 1.6k • written 7.6 years ago by massimo.acquaviva.78 • 0

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3.4k

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ruv ruvseq ruvnormalize single-cell zero-inflated

updated 8.1 years ago by davide risso ▴ 980 • written 8.1 years ago by Nik Tuzov ▴ 90

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3.1k

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RUV ruvseq ruvr ruvnormalize single cell

8.1 years ago Nik Tuzov ▴ 90

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1.6k

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edger ruvseq rnaseq normalization ruvnormalize

updated 8.2 years ago by davide risso ▴ 980 • written 8.2 years ago by manish20072013 • 0

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2.0k

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ruvseq RUV ruvnormalize ruvg

9.1 years ago anthonycolombo60 • 0

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2.0k

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normalization ruvseq ruvnormalize ruvs eda

9.4 years ago • updated 9.3 years ago thomas.wolfe • 0

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1.7k

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rnaseq ruvnormalize normalization technical replicates

9.7 years ago thomas.wolfe • 0

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1.6k

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ruvnormalize microarray normalization

updated 10.2 years ago by laurent.jacob ▴ 10 • written 10.2 years ago by Cornwell, Adam ▴ 110

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1.6k

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RUVNormalize Subsetting

updated 10.2 years ago by laurent.jacob ▴ 10 • written 10.3 years ago by Dario Strbenac ★ 1.6k

14 results • Page 1 of 1

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Comment: How to account for solvent controls in DESeq2 when comparing follicular vs lutea by snijesh ▴ 200

I would like to clarify whether the command `res <- results(dds, name = "phaseLP.conditionTreated")` is the correct approach to generate …

Comment: How to account for solvent controls in DESeq2 when comparing follicular vs lutea by James W. MacDonald 68k

Not sure I understand. You ask how to do something and then show how one would do so.

Comment: DiffBind getting Fold values of near 0 by littlefishes20 ▴ 10

Same issues. All peaks return to a fold near 0, although they are significant when visualizing in IGV. Please find the MAplot and volcanoPl…

Comment: How to account for solvent controls in DESeq2 when comparing follicular vs lutea by snijesh ▴ 200

I have checked DEGs between Solvent Control (SC) of FP and LP and there are noticebale differences in terms of DEGs. ``` # Checking SC in …

Answer: A0A287BB68 not recognized as UNPROT key in org.Ss.eg.db using AnnotationDbi::sel by James W. MacDonald 68k

Apparently it's been over-ridden by a different UniProtKB ID ``` > select(org.Ss.eg.db, "MYH11", "UNIPROT", "SYMBOL") 'select()' retu…

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How to account for solvent controls in DESeq2 when comparing follicular vs luteal phase?

Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea

Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi

Can NanoString data be analyzed using DESeq2?

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