Biostar RUVnormalize

Showing : RUVnormalize • reset

votes

994

views

RUVNormalize Subsetting

updated 7.7 years ago by laurent.jacob ▴ 10 • written 7.8 years ago by Dario Strbenac ★ 1.5k

votes

replies

1.1k

views

normalization ruvseq ruvnormalize ruvs eda

6.9 years ago thomas.wolfe • 0

votes

1.2k

views

ruvseq RUV ruvnormalize ruvg

6.7 years ago anthonycolombo60 • 0

votes

1.0k

views

edger ruvseq rnaseq normalization ruvnormalize

updated 5.7 years ago by davide risso ▴ 920 • written 5.7 years ago by manish20072013 • 0

votes

replies

1.9k

views

ruv ruvseq ruvnormalize single-cell zero-inflated

updated 5.6 years ago by davide risso ▴ 920 • written 5.6 years ago by Nik Tuzov ▴ 80

vote

replies

1.7k

views

RUV ruvseq ruvr ruvnormalize single cell

5.6 years ago Nik Tuzov ▴ 80

vote

1.0k

views

ruvnormalize microarray normalization

updated 7.7 years ago by laurent.jacob ▴ 10 • written 7.8 years ago by Cornwell, Adam ▴ 110

votes

411

views

RUVnormalize protein mi

4.4 years ago losik • 0

votes

replies

1.0k

views

rnaseq ruvnormalize normalization technical replicates

7.3 years ago thomas.wolfe • 0

votes

replies

642

views

RUVnormalize R edgeR RUVSeq RUVnormalizeData

9 months ago • updated 8 months ago Mohamed • 0

votes

replies

647

views

RUVnormalize limma corrected expression matrix microarray

updated 5.2 years ago by Dario Strbenac ★ 1.5k • written 5.2 years ago by massimo.acquaviva.78 • 0

11 results • Page 1 of 1

Recent ...

Replies

Answer: Correct script for featurecounts in Rsubread by James W. MacDonald 62k

Here's the relevant section from `?featureCounts` ``` Value: A list with the following components: counts: a data matrix c…

Comment: Can I run DESeq2 with SMART-Seq data by Assa Yeroslaviz ★ 1.5k

thanks, the filter is the other way around, true 🙈

Comment: Can I run DESeq2 with SMART-Seq data by Assa Yeroslaviz ★ 1.5k

I haven't seen this part before. Thanks for pointing it out.

Answer: Can I run DESeq2 with SMART-Seq data by Michael Love 39k

There should be no problem to run DESeq2. You can leave the filtering to `results()` or, better, use IHW. Your filter looks wrong, it…

Comment: Can I run DESeq2 with SMART-Seq data by ATpoint ★ 2.4k

The choice of preprocessing is on you. There are a variety of benchmark papers and preprints you can get guidance from. Towards prefilteri…

Votes

Comment: Time-course, comparison of two groups

Answer: Can I run DESeq2 with SMART-Seq data

Comment: Can I run DESeq2 with SMART-Seq data

Answer: minfi support of illumina Infinium methylationEPIC v2.0

Awards • All